RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 SUCNR1Q9BXA5 334 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 CST11Q9H112 138 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 SPACA1Q9HBV2 294 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 ONECUT1Q9UBC0 465 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 ING4Q9UNL4 249 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 LINC00312Q9Y6C7 94 aa9.12□□□□□ -0.95
CPSF7-212ENST00000489728 TRAV40A0A0B4J280 105 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 A0A0G2JK05 382 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 hADV38S2A0JD32 116 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 TRIM64CA6NLI5 447 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 SIRPB1O00241 398 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 SLC33A1O00400 549 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-212ENST00000489728 PDCD5O14737 125 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 HTR3BO95264 441 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 PRTN3P24158 256 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 MYL9P24844 172 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 CALRP27797 417 aaKnown RBP9.11□□□□□ -0.95
CPSF7-212ENST00000489728 DUSP1P28562 367 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 P2RX3P56373 397 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 ARF6P62330 175 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 SLC22A6Q4U2R8 563 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 TMEM200BQ69YZ2 307 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 GLIPR1L1Q6UWM5 242 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 PRIMA1Q86XR5 153 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 FAM185AQ8N0U4 392 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 BPIFB2Q8N4F0 458 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 Q8N7P7 452 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 TSPAN14Q8NG11 270 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 OR4D6Q8NGJ1 314 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-212ENST00000489728 JMJD8Q96S16 334 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 PPIL3Q9H2H8 161 aaKnown RBP9.11□□□□□ -0.95
CPSF7-212ENST00000489728 C19orf12Q9NSK7 152 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 STUB1Q9UNE7 303 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 ST3GAL6Q9Y274 331 aa9.11□□□□□ -0.95
CPSF7-212ENST00000489728 UBE2J1Q9Y385 318 aaPredicted RBP9.11□□□□□ -0.95
CPSF7-212ENST00000489728 JMJD1CQ15652 2540 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 IGHV1-69DA0A0B4J2H0 117 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 C17orf98A8MV24 154 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 SLC17A2O00624 439 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 TCF21O43680 179 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 BPNT1O95861 308 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 IGHV1-69P01742 117 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 GLAP06280 429 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 ZNF728P0DKX0 622 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 CALCBP10092 127 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 SERPINA2P20848 420 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 HTR2CP28335 458 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 SNU13P55769 128 aaKnown RBP9.1□□□□□ -0.95
CPSF7-212ENST00000489728 EDDM3BP56851 147 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 PIGYQ3MUY2 71 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 TIMM50Q3ZCQ8 353 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 OR2W3Q7Z3T1 314 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 VMO1Q7Z5L0 202 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 OR4S1Q8NGB4 309 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 KCNG3Q8TAE7 436 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 CORO2AQ92828 525 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 Q96M66 194 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 NR1H4Q96RI1 486 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-212ENST00000489728 MS4A7Q9GZW8 240 aaPredicted RBP9.1□□□□□ -0.95
CPSF7-212ENST00000489728 OR6C3Q9NZP0 311 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 RCC2Q9P258 522 aaKnown RBP9.1□□□□□ -0.95
CPSF7-212ENST00000489728 FBLN5Q9UBX5 448 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 SVEP1Q4LDE5 3571 aa9.1□□□□□ -0.95
CPSF7-212ENST00000489728 TRGV10A0A0A0MS01 117 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 TRAV24A0A0B4J272 114 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 CENPVL3A0A0U1RRI6 287 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 GEMIN2O14893 280 aaKnown RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 OR7C1O76099 320 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 IGHV4-38-2P0DP08 117 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 MGMTP16455 207 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 JUNBP17275 347 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 UBE2E1P51965 193 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 DLX6P56179 175 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 HILS1P60008 231 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ERVFRD-1P60508 538 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 SCN1BQ07699 218 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 RBM39Q14498 530 aaKnown RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 EDDM3AQ14507 147 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ZNF273Q14593 569 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 NEDD8Q15843 81 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 PAN3Q58A45 887 aaKnown RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 GDPGP1Q6ZNW5 385 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 TPRA1Q86W33 373 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 OR4M1Q8NGD0 313 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ZFAND2BQ8WV99 257 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 TNFRSF14Q92956 283 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ZNF714Q96N38 554 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 DPCDQ9BVM2 203 aaPredicted RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 BARHL1Q9BZE3 327 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 CHST6Q9GZX3 395 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 PPA2Q9H2U2 334 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 GAL3ST2Q9H3Q3 398 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 PRDM13Q9H4Q3 707 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 HEXA-AS1Q9H8Q6 139 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ZMAT3Q9HA38 289 aaKnown RBP9.09□□□□□ -0.95
CPSF7-212ENST00000489728 PLGRKTQ9HBL7 147 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 TAS2R3Q9NYW6 316 aa9.09□□□□□ -0.95
CPSF7-212ENST00000489728 ZNF69Q9UC07 566 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms