RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 DEGS1O15121 323 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 MYL12AP19105 171 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 CDK2P24941 298 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 DCKP27707 260 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 OR3A4PP47883 348 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 ADARB1P78563 741 aaKnown RBP11.31□□□□□ -0.6
VTI1A-206ENST00000489142 AANATQ16613 207 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 PIGYQ3MUY2 71 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 KRBOX4Q5JUW0 171 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 UTF1Q5T230 341 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 ZNF529Q6P280 563 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 RPL22L1Q6P5R6 122 aaKnown RBP11.31□□□□□ -0.6
VTI1A-206ENST00000489142 TMPRSS11AQ6ZMR5 421 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 DHRSXQ8N5I4 330 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 TMEM106AQ96A25 262 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 FOXRED1Q96CU9 486 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-206ENST00000489142 MALSU1Q96EH3 234 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 CLEC7AQ9BXN2 247 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 ABCB10Q9NRK6 738 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 ZNF581Q9P0T4 197 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 DIMT1Q9UNQ2 313 aaKnown RBP11.31□□□□□ -0.6
VTI1A-206ENST00000489142 TCF19Q9Y242 345 aa11.31□□□□□ -0.6
VTI1A-206ENST00000489142 UBE2J1Q9Y385 318 aaPredicted RBP11.31□□□□□ -0.6
VTI1A-206ENST00000489142 PNMA8CA0A1B0GUJ8 204 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 ODAMA1E959 279 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 VGLL3A8MV65 326 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 H0YJX3 145 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 MAGEB3O15480 346 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 ALX3O95076 343 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 CDRT1O95170 752 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 HTR3BO95264 441 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 LMO1P25800 156 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 ERP29P30040 261 aaKnown RBP11.3□□□□□ -0.6
VTI1A-206ENST00000489142 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 CCDC58Q4VC31 144 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 TTC23Q5W5X9 447 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 KLHDC1Q8N7A1 406 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 SETD9Q8NE22 299 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 RPS4Y2Q8TD47 263 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 GPR148Q8TDV2 347 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 GGHQ92820 318 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 TMEM80Q96HE8 168 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 FBLN5Q9UBX5 448 aa11.3□□□□□ -0.6
VTI1A-206ENST00000489142 TRAV24A0A0B4J272 114 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 MAGEA13PA6NCF6 341 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 A6NDX4 124 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 F2RL2O00254 374 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 OGG1O15527 345 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 XPNPEP2O43895 674 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 VSIG10L2P0DP72 767 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 CD24P25063 80 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 GLP1RP43220 463 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 MTNR1BP49286 362 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 EFNB2P52799 333 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 DOC2BQ14184 412 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 RSU1Q15404 277 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 PAN3Q58A45 887 aaKnown RBP11.29□□□□□ -0.6
VTI1A-206ENST00000489142 DDI2Q5TDH0 399 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 LAIR2Q6ISS4 152 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 ABHD12Q8N2K0 398 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 PACRGLQ8N7B6 248 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 CHST4Q8NCG5 386 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 OR4P4Q8NGL7 312 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 OR2T6Q8NHC8 308 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 FAM110DQ8TAY7 271 aaPredicted RBP11.29□□□□□ -0.6
VTI1A-206ENST00000489142 HAVCR2Q8TDQ0 301 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 GHSRQ92847 366 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 SMIM19Q96E16 107 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 NPFFR1Q9GZQ6 430 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 GAL3ST2Q9H3Q3 398 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 ZNF702PQ9H963 129 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 ZNF286AQ9HBT8 521 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 BABAM2Q9NXR7 383 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 ING4Q9UNL4 249 aa11.29□□□□□ -0.6
VTI1A-206ENST00000489142 EXOSC1Q9Y3B2 195 aaKnown RBP11.29□□□□□ -0.6
VTI1A-206ENST00000489142 TRAV39A0A0B4J263 110 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 A0A1W2PPK0 400 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 IRGMA1A4Y4 181 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 IGHV3-7P01780 117 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 CD2P06729 351 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 NFYBP25208 207 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 CAPGP40121 348 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 PTGFRP43088 359 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 KIR2DS4P43632 304 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 PPP3R1P63098 170 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 ST3GAL4Q11206 333 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 C17orf58Q2M2W7 97 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 FBLN7Q53RD9 439 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 OGFRL1Q5TC84 451 aaPredicted RBP11.28□□□□□ -0.6
VTI1A-206ENST00000489142 ELP2Q6IA86 826 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 HEPN1Q6WQI6 88 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 Q6ZS46 218 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 AHSA2Q719I0 299 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 LYG1Q8N1E2 194 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 PXT1Q8NFP0 134 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 OR13A1Q8NGR1 328 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 CORO2AQ92828 525 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 OR5M11Q96RB7 305 aa11.28□□□□□ -0.6
VTI1A-206ENST00000489142 MMP27Q9H306 513 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms