RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 ZFP41Q8N8Y5 198 aa20.22■□□□□ 0.83
HMGN1-217ENST00000489072 PXT1Q8NFP0 134 aa20.22■□□□□ 0.83
HMGN1-217ENST00000489072 FBLIM1Q8WUP2 373 aa20.22■□□□□ 0.83
HMGN1-217ENST00000489072 TNFAIP8L1Q8WVP5 186 aa20.22■□□□□ 0.83
HMGN1-217ENST00000489072 COQ2Q96H96 371 aa20.22■□□□□ 0.83
HMGN1-217ENST00000489072 UBE2J1Q9Y385 318 aaPredicted RBP20.22■□□□□ 0.83
HMGN1-217ENST00000489072 MAGEB3O15480 346 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 DYNC1I2Q13409 638 aaKnown RBP20.21■□□□□ 0.83
HMGN1-217ENST00000489072 SLC35E4Q6ICL7 350 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 BAIAP2L2Q6UXY1 529 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 CHST4Q8NCG5 386 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 GHSRQ92847 366 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 GPER1Q99527 375 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 TMEM133Q9H2Q1 129 aa20.21■□□□□ 0.83
HMGN1-217ENST00000489072 CHCHD3Q9NX63 227 aaKnown RBP20.21■□□□□ 0.83
HMGN1-217ENST00000489072 IGHV2-26A0A0B4J1V2 119 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 TRBV5-5A0A0J9YX44 114 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 EFCAB10A6NFE3 127 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 VGLL3A8MV65 326 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 DEGS1O15121 323 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 CHST1O43916 411 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 CSN2P05814 226 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 MED21Q13503 144 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 ASCL4Q6XD76 172 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 OR10K1Q8NGX5 313 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 CORO2AQ92828 525 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 FOXRED1Q96CU9 486 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-217ENST00000489072 MALSU1Q96EH3 234 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 CPNE2Q96FN4 548 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-217ENST00000489072 NR1H4Q96RI1 486 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-217ENST00000489072 CNOT2Q9NZN8 540 aaKnown RBP20.2■□□□□ 0.82
HMGN1-217ENST00000489072 NKX1-2Q9UD57 310 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-217ENST00000489072 PSORS1C1Q9UIG5 152 aa20.2■□□□□ 0.82
HMGN1-217ENST00000489072 TRGV10A0A0A0MS01 117 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 ALDOBP05062 364 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 OR3A4PP47883 348 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 RAB13P51153 203 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 RPS11P62280 158 aaKnown RBP eCLIP20.19■□□□□ 0.82
HMGN1-217ENST00000489072 DOC2BQ14184 412 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 ATXN7L3Q14CW9 347 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-217ENST00000489072 SSX2Q16385 188 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 PRAMEF5Q5TYX0 476 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 PGLYRP3Q96LB9 341 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 FAM192AQ9GZU8 254 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 PLCXD1Q9NUJ7 323 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 ING3Q9NXR8 418 aa20.19■□□□□ 0.82
HMGN1-217ENST00000489072 ODAMA1E959 279 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 FUOMA2VDF0 154 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 H0YJX3 145 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 JUNBP17275 347 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-217ENST00000489072 GDNFP39905 211 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 FAM189A2Q15884 450 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 KRBOX4Q5JUW0 171 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 TREML4Q6UXN2 200 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 AHSA2Q719I0 299 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 Q8NFD4 153 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 OR51T1Q8NGJ9 327 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 TFAP2CQ92754 450 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 CLEC7AQ9BXN2 247 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 PPIL3Q9H2H8 161 aaKnown RBP20.18■□□□□ 0.82
HMGN1-217ENST00000489072 DCLRE1BQ9H816 532 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 TMEM138Q9NPI0 162 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 TAS2R3Q9NYW6 316 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 SIGLEC9Q9Y336 463 aa20.18■□□□□ 0.82
HMGN1-217ENST00000489072 TRAV24A0A0B4J272 114 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 HSPB6O14558 160 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 CDRT1O95170 752 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 IGFBP3P17936 291 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-217ENST00000489072 CDK2P24941 298 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 C21orf33P30042 268 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-217ENST00000489072 PTGFRP43088 359 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 PPP3R1P63098 170 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 RSU1Q15404 277 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 PIGYQ3MUY2 71 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 DDI2Q5TDH0 399 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 CCBE1Q6UXH8 406 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-217ENST00000489072 HEPN1Q6WQI6 88 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 BPIFB6Q8NFQ5 453 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 GAL3ST2Q9H3Q3 398 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 FBLN5Q9UBX5 448 aa20.17■□□□□ 0.82
HMGN1-217ENST00000489072 MAGEA13PA6NCF6 341 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 BDKRB2P30411 391 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 GABRA5P31644 462 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 IL13RA2Q14627 380 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 Q499Y3 187 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 YIF1BQ5BJH7 314 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 MINOS1Q5TGZ0 78 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 OR4P4Q8NGL7 312 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 RAB18Q9NP72 206 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 FKBP14Q9NWM8 211 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 ZNF581Q9P0T4 197 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 TCF19Q9Y242 345 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 HILPDAQ9Y5L2 63 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 MINOS1-NBL1R4GNA1 71 aa20.16■□□□□ 0.82
HMGN1-217ENST00000489072 TRAV8-7A0A075B6U6 113 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 PNMA8CA0A1B0GUJ8 204 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 HTR3BO95264 441 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 ZNF93P35789 620 aaPredicted RBP20.15■□□□□ 0.82
HMGN1-217ENST00000489072 RIPK1Q13546 671 aa20.15■□□□□ 0.82
HMGN1-217ENST00000489072 PAN3Q58A45 887 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms