RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 SLC6A1P30531 599 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 CBX5P45973 191 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RAB25P57735 213 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 KRTAP12-4P60329 112 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RAB8AP61006 207 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 ELF3P78545 371 aaPredicted RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 PRDX1Q06830 199 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 FUT5Q11128 374 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 GOLGA7BQ2TAP0 167 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 FAM104BQ5XKR9 115 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 MED27Q6P2C8 311 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 ZNF773Q6PK81 442 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 BRD3OSQ6XYD6 125 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 DGAT2L6Q6ZPD8 337 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 FAM183BPQ6ZVS7 135 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 PRNTQ86SH4 94 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 LINC00596Q86U02 117 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 STK40Q8N2I9 435 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 MIR7-3HGQ8N6C7 128 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 TMEM105Q8N8V8 129 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 MNS1Q8NEH6 495 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 ZNF555Q8NEP9 628 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 ACTL9Q8TC94 416 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 DYNC2LI1Q8TCX1 351 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RNASEH2CQ8TDP1 164 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 DTD1Q8TEA8 209 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 TWIST2Q8WVJ9 160 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 CCL17Q92583 94 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 DDIT4LQ96D03 193 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 ZNF514Q96K75 400 aaPredicted RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 PGLYRP3Q96LB9 341 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 DERL3Q96Q80 235 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 C7orf50Q9BRJ6 194 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 LLPHQ9BRT6 129 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 DCUN1D5Q9BTE7 237 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 FAAP24Q9BTP7 215 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 THTPAQ9BU02 230 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 TAPBPLQ9BX59 468 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 MS4A8Q9BY19 250 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RHOFQ9HBH0 211 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RDH14Q9HBH5 336 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 SND1-IT1Q9HBX3 110 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 HMGXB4Q9UGU5 601 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 RWDD2AQ9UIY3 292 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 PSMD13Q9UNM6 376 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 C14orf166Q9Y224 244 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 NOSIPQ9Y314 301 aaKnown RBP1.67□□□□□ -2.14
RFC4-213ENST00000489028 PUS1Q9Y606 427 aaKnown RBP eCLIP1.67□□□□□ -2.14
RFC4-213ENST00000489028 S4R3C0 116 aa1.67□□□□□ -2.14
RFC4-213ENST00000489028 TRAV8-3A0A0A6YYJ7 113 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 IGKV1-6A0A0C4DH72 117 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 C1orf232A0A0U1RR37 186 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 MYBPHLA2RUH7 354 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 GMNCA6NCL1 334 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 CEACAM18A8MTB9 384 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 C9J4A7 227 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 H3BP45 60 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 PDCD6O75340 191 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 CBR3O75828 277 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 LHBP01229 141 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 IGHV1-46P01743 117 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 IGKV5-2P06315 115 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 SEC11BP0C7V7 166 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 RD3LP0DJH9 198 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 MLNP12872 115 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ZNF35P13682 527 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 CD40LGP29965 261 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 PYCR1P32322 319 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 IDH2P48735 452 aaKnown RBP1.66□□□□□ -2.14
RFC4-213ENST00000489028 STC1P52823 247 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 OR10A3P58181 314 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 C1QTNF8P60827 252 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ZNF616Q08AN1 781 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ZNHIT3Q15649 155 aaPredicted RBP1.66□□□□□ -2.14
RFC4-213ENST00000489028 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ZNF678Q5SXM1 525 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 MRPL2Q5T653 305 aaKnown RBP1.66□□□□□ -2.14
RFC4-213ENST00000489028 FAM162BQ5T6X4 162 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 GLYATQ6IB77 296 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 NIPAL1Q6NVV3 410 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 CALHM3Q86XJ0 350 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 PLCZ1Q86YW0 608 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 BOD1L2Q8IYS8 172 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ST20-AS1Q8NBB2 130 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 LFNGQ8NES3 379 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 TNFRSF14Q92956 283 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 YIPF5Q969M3 257 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 WDR34Q96EX3 536 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 PPP1R36Q96LQ0 422 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 TMEM56Q96MV1 263 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 UGT2B28Q9BY64 529 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 MFSD1Q9H3U5 465 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 POMKQ9H5K3 350 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 DHX35Q9H5Z1 703 aaKnown RBP1.66□□□□□ -2.14
RFC4-213ENST00000489028 EURLQ9NYK6 297 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 TAS2R13Q9NYV9 303 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 FBXL3Q9UKT7 428 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 ATP6V1DQ9Y5K8 247 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 SLC22A7Q9Y694 548 aa1.66□□□□□ -2.14
RFC4-213ENST00000489028 SIGLEC1Q9BZZ2 1709 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms