RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 TPRX1Q8N7U7 411 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 OR4S1Q8NGB4 309 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 OR2T6Q8NHC8 308 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 RPS4Y2Q8TD47 263 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 GPR148Q8TDV2 347 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 GPER1Q99527 375 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 CDCA4Q9BXL8 241 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 CLEC7AQ9BXN2 247 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 NPFFR1Q9GZQ6 430 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MMP27Q9H306 513 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 BLOC1S6Q9UL45 172 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 TPRKBQ9Y3C4 175 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 MINOS1-NBL1R4GNA1 71 aa11.19□□□□□ -0.62
SPTLC1-207ENST00000488921 IGHV2-26A0A0B4J1V2 119 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 EFCAB10A6NFE3 127 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 E9PI62 339 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 KIR2DS4P43632 304 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 KRTAP10-3P60369 221 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 ZP1P60852 638 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 CDK5R1Q15078 307 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 FAM189A2Q15884 450 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 SMN1Q16637 294 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 RBM48Q5RL73 367 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 ASPHD2Q6ICH7 369 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 CRIP3Q6Q6R5 217 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 PXT1Q8NFP0 134 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 FBLIM1Q8WUP2 373 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 YTHDF1Q9BYJ9 559 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 TMEM133Q9H2Q1 129 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 PLCXD1Q9NUJ7 323 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 CHCHD3Q9NX63 227 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 TAS2R3Q9NYW6 316 aa11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 DIMT1Q9UNQ2 313 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 EXOSC1Q9Y3B2 195 aaKnown RBP11.18□□□□□ -0.62
SPTLC1-207ENST00000488921 H3BUI4 141 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 PAX6P26367 422 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 ETV1P50549 477 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 DYNLT3P51808 116 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 GTF2A1P52655 376 aaPredicted RBP11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 SSX2Q16385 188 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 C2orf68Q2NKX9 166 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 PLA1AQ53H76 456 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 ELP2Q6IA86 826 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 RTN4RL2Q86UN3 420 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 STX19Q8N4C7 294 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 NDNFQ8TB73 568 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 MYDGFQ969H8 173 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 TMEM106AQ96A25 262 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 TCF19Q9Y242 345 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 KIAA2026Q5HYC2 2103 aa11.17□□□□□ -0.62
SPTLC1-207ENST00000488921 A0A0G2JK05 382 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 ODAMA1E959 279 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 PTGES3LE9PB15 166 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 F2RL2O00254 374 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 SLC33A1O00400 549 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 DEGS1O15121 323 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 PTGFRP43088 359 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 SOX2P48431 317 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 ARHGDIBP52566 201 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 EFNB2P52799 333 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 PPP3R1P63098 170 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 SCN1BQ07699 218 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 AESQ08117 197 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 IL13RA2Q14627 380 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 KRBOX4Q5JUW0 171 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 ZNF529Q6P280 563 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 HEPN1Q6WQI6 88 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 Q6ZTK2 550 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 RNF144BQ7Z419 303 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 SATL1Q86VE3 508 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 DYNAPQ8N1N2 210 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 ZNF596Q8TC21 504 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 PIFOQ8TCI5 191 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 TNFAIP8L1Q8WVP5 186 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 RGP1Q92546 391 aaPredicted RBP11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 CORO2AQ92828 525 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 SMIM19Q96E16 107 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 TMEM80Q96HE8 168 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 FAM192AQ9GZU8 254 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 TAS2R4Q9NYW5 299 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 CNOT2Q9NZN8 540 aaKnown RBP11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 OR6C3Q9NZP0 311 aa11.16□□□□□ -0.62
SPTLC1-207ENST00000488921 ZNF729A6NN14 1252 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 GABRPO00591 440 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 XPNPEP2O43895 674 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 CHST1O43916 411 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 ALDOBP05062 364 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 CDK2P24941 298 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 HTR1DP28221 377 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 GLIPR1P48060 266 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 ATXN7L3Q14CW9 347 aaPredicted RBP11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 HERPUD1Q15011 391 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 RSU1Q15404 277 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 OR2G6Q5TZ20 316 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 Q6P435 159 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 OR4D6Q8NGJ1 314 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 OR51T1Q8NGJ9 327 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 OR52N1Q8NH53 320 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 GGHQ92820 318 aa11.15□□□□□ -0.62
SPTLC1-207ENST00000488921 CREB3L1Q96BA8 519 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms