RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 SPATA31E1Q6ZUB1 1445 aa1.46□□□□□ -2.18
CD46-215ENST00000488596 PRR14LQ5THK1 2151 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 IGLV10-54A0A075B6I4 117 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 IGHV3-21A0A0B4J1V1 117 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 MYBPHLA2RUH7 354 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 LEUTXA8MZ59 168 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 E7EQL1 145 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 IGHV3-53P01767 116 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 GTF2F2P13984 249 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 GABRA1P14867 456 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 PRTN3P24158 256 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 DNASE1L1P49184 302 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 UBE2KP61086 200 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 VAMP3Q15836 100 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 C18orf21Q32NC0 220 aaPredicted RBP1.45□□□□□ -2.18
CD46-215ENST00000488596 NXNL2Q5VZ03 156 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 SMARCD3Q6STE5 483 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 COMTD1Q86VU5 262 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 CPNE9Q8IYJ1 553 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 ZNF75CPQ92670 426 aaPredicted RBP1.45□□□□□ -2.18
CD46-215ENST00000488596 SLC25A44Q96H78 314 aaPredicted RBP1.45□□□□□ -2.18
CD46-215ENST00000488596 OLFM3Q96PB7 478 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 RAB1BQ9H0U4 201 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 RHOFQ9HBH0 211 aa1.45□□□□□ -2.18
CD46-215ENST00000488596 NXT1Q9UKK6 140 aaKnown RBP1.45□□□□□ -2.18
CD46-215ENST00000488596 ZNF443Q9Y2A4 671 aaPredicted RBP1.45□□□□□ -2.18
CD46-215ENST00000488596 TRAV8-3A0A0A6YYJ7 113 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 PGPA6NDG6 321 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 A6NED7 52 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 SDHAF1A6NFY7 115 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 CD300LBA8K4G0 201 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 H3BMM0 161 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 C3orf84H3BNL1 204 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 PSMD11O00231 422 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 SYNGR2O43760 224 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 CTLA4P16410 223 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 CRABP2P29373 138 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 LCN1P31025 176 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 LGALS7P47929 136 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 GCLMP48507 274 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 ZNF83P51522 516 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 PLTPP55058 493 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 KRTAP6-3Q3LI67 103 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 HBMQ6B0K9 141 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 RBM45Q8IUH3 476 aaKnown RBP1.44□□□□□ -2.18
CD46-215ENST00000488596 CDRT4Q8N9R6 151 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 OR5P3Q8WZ94 311 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 APOBEC3DQ96AK3 386 aaPredicted RBP1.44□□□□□ -2.18
CD46-215ENST00000488596 UBE2WQ96B02 151 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 ZMYND19Q96E35 227 aaPredicted RBP1.44□□□□□ -2.18
CD46-215ENST00000488596 CPB2Q96IY4 423 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 TRIB3Q96RU7 358 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 APOL4Q9BPW4 351 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 TSSK6Q9BXA6 273 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 IFT46Q9NQC8 304 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 CYB5R1Q9UHQ9 305 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 BTRCQ9Y297 605 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 STK38LQ9Y2H1 464 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 NUP205Q92621 2012 aa1.44□□□□□ -2.18
CD46-215ENST00000488596 LTBP2Q14767 1821 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 IGKV1D-37A0A075B6S9 117 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 D6RAR5 112 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 SHOX2O60902 331 aaPredicted RBP1.43□□□□□ -2.18
CD46-215ENST00000488596 HLA-AP01891 365 aaKnown RBP1.43□□□□□ -2.18
CD46-215ENST00000488596 CECR9P0C854 216 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 CNTFRP26992 372 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 MAGEA3P43357 314 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 DHRS2Q13268 280 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 CASP8Q14790 479 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 TRAM1Q15629 374 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 TRIP13Q15645 432 aaPredicted RBP1.43□□□□□ -2.18
CD46-215ENST00000488596 TMEM215Q68D42 235 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 ELP2Q6IA86 826 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 Q6ZQT7 251 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 Q6ZT83 130 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 C10orf107Q8IVU9 208 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 RPRMLQ8N4K4 120 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 SPICQ8N5J4 248 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 C3orf22Q8N5N4 141 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 GATD1Q8NB37 220 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 ZCCHC13Q8WW36 166 aaKnown RBP1.43□□□□□ -2.18
CD46-215ENST00000488596 OR5P2Q8WZ92 322 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 CATSPER2Q96P56 530 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 MFSD1Q9H3U5 465 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 AGPAT3Q9NRZ7 376 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 TAS2R13Q9NYV9 303 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 U3KQK5 164 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 DYSFO75923 2080 aa1.43□□□□□ -2.18
CD46-215ENST00000488596 ATRNO75882 1429 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 J3QRE1 110 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 S100A9P06702 114 aaKnown RBP1.42□□□□□ -2.18
CD46-215ENST00000488596 ZNF3P17036 446 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 TSPOP30536 169 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 TTPAP49638 278 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 VSNL1P62760 191 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 HBG1P69891 147 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 HBG2P69892 147 aa1.42□□□□□ -2.18
CD46-215ENST00000488596 PRDX1Q06830 199 aaKnown RBP1.42□□□□□ -2.18
CD46-215ENST00000488596 CEACAM21Q3KPI0 293 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms