RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 OR5M11Q96RB7 305 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 ANKRD60Q9BZ19 345 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 CHIAQ9BZP6 476 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 FAM192AQ9GZU8 254 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 FAM234AQ9H0X4 552 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 PPA2Q9H2U2 334 aa5.84□□□□□ -1.47
UBE4B-209ENST00000487244 METTL8Q9H825 291 aaKnown RBP5.84□□□□□ -1.47
UBE4B-209ENST00000487244 UNKLQ9H9P5 680 aaKnown RBP5.84□□□□□ -1.47
UBE4B-209ENST00000487244 CHCHD3Q9NX63 227 aaKnown RBP5.84□□□□□ -1.47
UBE4B-209ENST00000487244 LSM2Q9Y333 95 aaKnown RBP5.84□□□□□ -1.47
UBE4B-209ENST00000487244 A0A0G2JK05 382 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 MEIOCA2RUB1 952 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 TMEM89A2RUT3 159 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 CLDN34H7C241 214 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 HSPB6O14558 160 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 MMP23AO75900 390 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 CD2P06729 351 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 OMGP23515 440 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 COX7A1P24310 79 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 BMXP51813 675 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 BPIFB3P59826 476 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 SCN1BQ07699 218 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 MED21Q13503 144 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 RIPK1Q13546 671 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 IRF3Q14653 427 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 ATXN7L3Q14CW9 347 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 GRK1Q15835 563 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 PIGYQ3MUY2 71 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 Q499Y3 187 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 YIF1BQ5BJH7 314 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 FAM27D1Q5T7N8 215 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 DDI2Q5TDH0 399 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 NCR3LG1Q68D85 454 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 BAIAP2L2Q6UXY1 529 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 C1orf122Q6ZSJ8 110 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 GDPD3Q7L5L3 318 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 SAXO1Q8IYX7 474 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 ZSCAN4Q8NAM6 433 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 GCDHQ92947 438 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 SLC25A28Q96A46 364 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 COQ2Q96H96 371 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 CYYR1Q96J86 154 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 SNX22Q96L94 193 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 CNBD2Q96M20 576 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 Q96M66 194 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 DERL3Q96Q80 235 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 NR1H4Q96RI1 486 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 GPER1Q99527 375 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 ZNF184Q99676 751 aaPredicted RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 CDCA4Q9BXL8 241 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 EXOSC4Q9NPD3 245 aaKnown RBP5.83□□□□□ -1.48
UBE4B-209ENST00000487244 TMEM138Q9NPI0 162 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 ING3Q9NXR8 418 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 ZNRD1Q9P1U0 126 aa5.83□□□□□ -1.48
UBE4B-209ENST00000487244 TRAV24A0A0B4J272 114 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 A0A1W2PP11 408 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 C17orf98A8MV24 154 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 SLC33A1O00400 549 aaPredicted RBP5.82□□□□□ -1.48
UBE4B-209ENST00000487244 SH2D1BO14796 132 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 ZNF728P0DKX0 622 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 HKR1P10072 659 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 ZNF44P15621 663 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 CRHBPP24387 322 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 BDKRB2P30411 391 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 ZNF93P35789 620 aaPredicted RBP5.82□□□□□ -1.48
UBE4B-209ENST00000487244 GDNFP39905 211 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 PTGFRP43088 359 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 MAP2K4P45985 399 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 IER3P46695 156 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 GLIPR1P48060 266 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 COMPP49747 757 aaPredicted RBP5.82□□□□□ -1.48
UBE4B-209ENST00000487244 UBE2E1P51965 193 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 P2RX3P56373 397 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 TAS2R43P59537 309 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 PPP3R1P63098 170 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 AESQ08117 197 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 BLMHQ13867 455 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 RSU1Q15404 277 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 SPHARQ15513 63 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 TAF9Q16594 264 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 AWAT1Q58HT5 328 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 LDLRAD2Q5SZI1 272 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 UTF1Q5T230 341 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 RNLSQ5VYX0 342 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 ELP2Q6IA86 826 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 FIP1L1Q6UN15 594 aaKnown RBP5.82□□□□□ -1.48
UBE4B-209ENST00000487244 C12orf54Q6X4T0 127 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 ASCL4Q6XD76 172 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 LHFPL4Q7Z7J7 247 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 LDLRAD3Q86YD5 345 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 DYNAPQ8N1N2 210 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 PXT1Q8NFP0 134 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 OR5D13Q8NGL4 314 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 RNF141Q8WVD5 230 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 SSMEM1Q8WWF3 244 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 MYDGFQ969H8 173 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 TMED9Q9BVK6 235 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 MND1Q9BWT6 205 aa5.82□□□□□ -1.48
UBE4B-209ENST00000487244 PPIL3Q9H2H8 161 aaKnown RBP5.82□□□□□ -1.48
UBE4B-209ENST00000487244 DUSP21Q9H596 190 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms