RNA–Protein interactions for RNA: ENST00000487043.5

PTCD3-216, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 1,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-216ENST00000487043 SKA3Q8IX90 412 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 FTMTQ8N4E7 242 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF485Q8NCK3 441 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 KLHL30-AS1Q8NEE0 82 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF555Q8NEP9 628 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 OR10G3Q8NGC4 313 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF563Q8TA94 476 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PIGXQ8TBF5 258 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM239Q8WW34 195 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 TMEM234Q8WY98 164 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 DGCR14Q96DF8 476 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 C1orf147Q96MC9 270 aaPredicted RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 OXGR1Q96P68 337 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 MBOAT4Q96T53 435 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 UTP23Q9BRU9 249 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 GABARAPL3Q9BY60 117 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ANKRD60Q9BZ19 345 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 SLC19A3Q9BZV2 496 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 UCK2Q9BZX2 261 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ING2Q9H160 280 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PTGES2Q9H7Z7 377 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ISG20L2Q9H9L3 353 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PROK2Q9HC23 129 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 NEK6Q9HC98 313 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 IL20Q9NYY1 176 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 UBAP1Q9NZ09 502 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 MED11Q9P086 117 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 KLHL21Q9UJP4 597 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 PAIP2BQ9ULR5 123 aaKnown RBP3.02□□□□□ -1.93
PTCD3-216ENST00000487043 MED31Q9Y3C7 131 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 ORC6Q9Y5N6 252 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 WIF1Q9Y5W5 379 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 HSPE1-MOB4S4R3N1 261 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 HEATR5AQ86XA9 2040 aa3.02□□□□□ -1.93
PTCD3-216ENST00000487043 DMXL1Q9Y485 3027 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 DOCK10Q96BY6 2186 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 IGKV1D-42A0A075B6H8 117 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 TMED7-TICAM2A0A0A6YYA0 188 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR5B21A6NL26 309 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 C17orf51A8MQB3 221 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 KLRC4-KLRK1H3BQV0 150 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 K7N7A8 449 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 NPIPB7O75200 414 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CRLF1O75462 422 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 RCBTB2O95199 551 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CLIC3O95833 236 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CRYGBP07316 175 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 GNAO1P09471 354 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CCL3P10147 92 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 NPR2P20594 1047 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 KITLGP21583 273 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 FKBP2P26885 142 aaKnown RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 GGT2P36268 569 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 EIF1P41567 113 aaKnown RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 VEGFCP49767 419 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 POLR2HP52434 150 aaKnown RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 DSCR4P56555 118 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CXCR4P61073 352 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CDK5Q00535 292 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CDC20Q12834 499 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR5I1Q13606 314 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 GINS1Q14691 196 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 QPRTQ15274 297 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 PRR4Q16378 134 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 MICBQ29980 383 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR2B11Q5JQS5 317 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 ATAD3CQ5T2N8 411 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 ZNF691Q5VV52 312 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 RAET1LQ5VY80 246 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 TIGD3Q6B0B8 471 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 SPINK14Q6IE38 97 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 SLC25A25Q6KCM7 469 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 RPL13AP3Q6NVV1 102 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 UGT2A3Q6UWM9 527 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 IGFL2Q6UWQ7 119 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 C5orf46Q6UWT4 87 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 MOB1BQ7L9L4 216 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 GTSCR1Q86UQ5 136 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 ERI1Q8IV48 349 aaKnown RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CYP4Z2PQ8N1L4 340 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CLDN22Q8N7P3 220 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 TPRX1Q8N7U7 411 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR2M3Q8NG83 312 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR4K17Q8NGC6 315 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 OR1J4Q8NGS1 313 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 TYMSOSQ8TAI1 123 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 ZPLD1Q8TCW7 415 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CYGBQ8WWM9 190 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 FGGYQ96C11 551 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 SGTBQ96EQ0 304 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 CNBD2Q96M20 576 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 TECTBQ96PL2 329 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 SIGLEC12Q96PQ1 595 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 PITX2Q99697 317 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 APOL4Q9BPW4 351 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 YTHDF1Q9BYJ9 559 aaKnown RBP3.01□□□□□ -1.93
PTCD3-216ENST00000487043 POTEKPQ9BYX7 375 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 Q9H3A6 140 aa3.01□□□□□ -1.93
PTCD3-216ENST00000487043 DSN1Q9H410 356 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms