RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 ZNF492Q9P255 531 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 POFUT2Q9Y2G5 429 aa2.38□□□□□ -2.03
SMC4-218ENST00000486711 ERICH2A1L162 156 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 MYBPHLA2RUH7 354 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ZNF233A6NK53 670 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 VGLL3A8MV65 326 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 RNASEK-C17orf49H0YIS7 233 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 M0QXV9 152 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ENTPD6O75354 484 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 IGKV5-2P06315 115 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 INAFM2P0DMQ5 153 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ZNF35P13682 527 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 PRDX1Q06830 199 aaKnown RBP2.37□□□□□ -2.03
SMC4-218ENST00000486711 OR4D1Q15615 310 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 TMEM215Q68D42 235 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ZNF660Q6AZW8 331 aaPredicted RBP2.37□□□□□ -2.03
SMC4-218ENST00000486711 CPNE9Q8IYJ1 553 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 FXYD5Q96DB9 178 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 OTUB2Q96DC9 234 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 OLFM3Q96PB7 478 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 LINC01587Q99440 93 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ZNF436Q9C0F3 470 aaPredicted RBP2.37□□□□□ -2.03
SMC4-218ENST00000486711 DUSP21Q9H596 190 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 ICOSQ9Y6W8 199 aa2.37□□□□□ -2.03
SMC4-218ENST00000486711 TICRRQ7Z2Z1 1910 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 NOS1P29475 1434 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 GPR179Q6PRD1 2367 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 SCN4AP35499 1836 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 IGHV3-21A0A0B4J1V1 117 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 IGHV3-43A0A0B4J1X8 118 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 D6RAR5 112 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 F5H5P2 479 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 M0QX08 132 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 ISLRO14498 428 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 KLHL2O95198 593 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 IGKV4-1P06312 121 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 GTF2F2P13984 249 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 NQO2P16083 231 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 PRPS1L1P21108 318 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 TSPOP30536 169 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 CASQ1P31415 396 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 PYCR1P32322 319 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 AQP5P55064 265 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 KLF3P57682 345 aaPredicted RBP2.36□□□□□ -2.03
SMC4-218ENST00000486711 ZNF235Q14590 738 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 LGALSLQ3ZCW2 172 aaPredicted RBP2.36□□□□□ -2.03
SMC4-218ENST00000486711 USP50Q70EL3 339 aaPredicted RBP2.36□□□□□ -2.03
SMC4-218ENST00000486711 C17orf78Q8N4C9 275 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 FAM45AQ8TCE6 357 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 OR5P2Q8WZ92 322 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 TAPBPLQ9BX59 468 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 ABCG5Q9H222 651 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 TXNIPQ9H3M7 391 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 ASF1BQ9NVP2 202 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 ENPP5Q9UJA9 477 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 SNX24Q9Y343 169 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 ABCB11O95342 1321 aa2.36□□□□□ -2.03
SMC4-218ENST00000486711 USP42Q9H9J4 1324 aaKnown RBP2.36□□□□□ -2.03
SMC4-218ENST00000486711 KIAA1671Q9BY89 1806 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 AK9Q5TCS8 1911 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 IGKV3D-11A0A0A0MRZ8 115 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 TRAV8-2A0A0B4J237 113 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 C4orf51C9J302 202 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 SULT1C2O00338 296 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 SGCEO43556 437 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 PDCD6O75340 191 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 PSIP1O75475 530 aaKnown RBP2.35□□□□□ -2.03
SMC4-218ENST00000486711 TNFAIP8O95379 198 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 NPPAP01160 153 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 IGLV6-57P01721 117 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 HLA-AP01891 365 aaKnown RBP2.35□□□□□ -2.03
SMC4-218ENST00000486711 AKR1C4P17516 323 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 TPBGQ13641 420 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 SYCP1Q15431 976 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 DEFB134Q4QY38 66 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 DGAT2L6Q6ZPD8 337 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 FAM183BPQ6ZVS7 135 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 OLIG3Q7RTU3 272 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 ADM2Q7Z4H4 148 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 GATD1Q8NB37 220 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 OR2M3Q8NG83 312 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 PGLYRP3Q96LB9 341 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 TM2D3Q9BRN9 247 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 FAAP24Q9BTP7 215 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 OR52A5Q9H2C5 316 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 MFSD1Q9H3U5 465 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 CHMP4BQ9H444 224 aaKnown RBP2.35□□□□□ -2.03
SMC4-218ENST00000486711 TRIP11Q15643 1979 aa2.35□□□□□ -2.03
SMC4-218ENST00000486711 ADAMTSL3P82987 1691 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 BAZ1BQ9UIG0 1483 aaKnown RBP2.34□□□□□ -2.03
SMC4-218ENST00000486711 IGHV2-26A0A0B4J1V2 119 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 ZNF729A6NN14 1252 aaPredicted RBP2.34□□□□□ -2.03
SMC4-218ENST00000486711 H3BQ85 93 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 C15orf65H3BRN8 121 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 CA2P00918 260 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 TRGV3P03979 118 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 SPNP16150 400 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 ATF1P18846 271 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 UGT2B10P36537 528 aa2.34□□□□□ -2.03
SMC4-218ENST00000486711 PLTPP55058 493 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms