RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 NAT1P18440 290 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 CBX5P45973 191 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 DUSP18Q8NEJ0 188 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 OR56B4Q8NH76 319 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 NEK7Q8TDX7 302 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 ERGIC1Q969X5 290 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 VRK1Q99986 396 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-207ENST00000486080 SPACA1Q9HBV2 294 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 TANC2Q9HCD6 1990 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF107Q9UII5 783 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-207ENST00000486080 METRNQ9UJH8 293 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 KLF2Q9Y5W3 355 aaPredicted RBP12.11□□□□□ -0.47
COL9A1-207ENST00000486080 RAB3DO95716 219 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 HPXP02790 462 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 CD74P04233 296 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 FCGR3AP08637 254 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 PSG2P11465 335 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 HRH1P35367 487 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 MRPS15P82914 257 aaKnown RBP12.11□□□□□ -0.47
COL9A1-207ENST00000486080 PAN3Q58A45 887 aaKnown RBP12.11□□□□□ -0.47
COL9A1-207ENST00000486080 CD177Q8N6Q3 437 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 BEST4Q8NFU0 473 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 OR11L1Q8NGX0 322 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 CACNG6Q9BXT2 260 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 ING3Q9NXR8 418 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 DNAJB11Q9UBS4 358 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 WIPI2Q9Y4P8 454 aa12.11□□□□□ -0.47
COL9A1-207ENST00000486080 IGKV1D-17A0A075B6S4 117 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 NAP1L6A6NFF2 107 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 PSPNO60542 156 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 PMP2P02689 132 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 CSN2P05814 226 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 DANCRP0C864 163 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 AMY2BP19961 511 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 MICBQ29980 383 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 C11orf71Q6IPW1 123 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 OR4K15Q8NH41 348 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 CHST6Q9GZX3 395 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 PPA2Q9H2U2 334 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 DPAGT1Q9H3H5 408 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 C12orf4Q9NQ89 552 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 ETAA1Q9NY74 926 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 GLS2Q9UI32 602 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 PLEKHA6Q9Y2H5 1048 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 NPTNQ9Y639 398 aa12.1□□□□□ -0.47
COL9A1-207ENST00000486080 OR2AT4A6NND4 320 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 H3BUI4 141 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 NAPSAO96009 420 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF735P0CB33 412 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 DTYMKP23919 212 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 PRDX2P32119 198 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 FAUP35544 74 aaKnown RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 COL10A1Q03692 680 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 ZNF782Q6ZMW2 699 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 C20orf204Q6ZNR8 217 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 OR51S1Q8NGJ8 323 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 PLPPR1Q8TBJ4 325 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 CCL17Q92583 94 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 UPRTQ96BW1 309 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 SLC6A7Q99884 636 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 UBTD1Q9HAC8 227 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 CHMP1AQ9HD42 196 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 TMEM82A0PJX8 343 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 TCRBP04435 133 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 AMY2AP04746 511 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 GLAP06280 429 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 IRF2P14316 349 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 PLA2G2AP14555 144 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 LMO1P25800 156 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 PPOXP50336 477 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 RBM39Q14498 530 aaKnown RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 ATXN7L3Q14CW9 347 aaPredicted RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 RNASE10Q5GAN6 216 aaKnown RBP12.09□□□□□ -0.47
COL9A1-207ENST00000486080 AGAP6Q5VW22 663 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 PLET1Q6UQ28 207 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 C5orf24Q7Z6I8 188 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 FAM90A1Q86YD7 464 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 DEFB108BQ8NET1 73 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 DEDD2Q8WXF8 326 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 FAIMQ9NVQ4 179 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 LAMP3Q9UQV4 416 aa12.09□□□□□ -0.47
COL9A1-207ENST00000486080 KIAA2026Q5HYC2 2103 aa12.08□□□□□ -0.47
COL9A1-207ENST00000486080 TRAV6A0A075B6T7 132 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 LRRC30A6NM36 301 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 IFNL4K9M1U5 179 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 CLDN1O95832 211 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 GABRA2P47869 451 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 RAB25P57735 213 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 C17orf107Q6ZR85 190 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 DTX2Q86UW9 622 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 MRPL30Q8TCC3 161 aaKnown RBP12.08□□□□□ -0.48
COL9A1-207ENST00000486080 TMEM165Q9HC07 324 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 NUDT15Q9NV35 164 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 ZNF222Q9UK12 451 aa12.08□□□□□ -0.48
COL9A1-207ENST00000486080 FASNP49327 2511 aaKnown RBP12.08□□□□□ -0.48
COL9A1-207ENST00000486080 A1L4Q6 167 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 LYNX1G3V0Z9 82 aa12.07□□□□□ -0.48
COL9A1-207ENST00000486080 TMEM178BH3BS89 294 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms