RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 CCL3L1P16619 93 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PRKACAP17612 351 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 IGFBP3P17936 291 aaPredicted RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 RAB3AP20336 220 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 CAPGP40121 348 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 POU3F4P49335 361 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 GTF2A1P52655 376 aaPredicted RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 DLX1P56177 255 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 LGALS4P56470 323 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PROK1P58294 105 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 TAS2R43P59537 309 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 BDH1Q02338 343 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 ST3GAL4Q11206 333 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 KLRD1Q13241 179 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 IL13RA2Q14627 380 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 GRK1Q15835 563 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 NHLRC3Q5JS37 347 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 ASPHD2Q6ICH7 369 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 OR52W1Q6IF63 320 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 C11orf88Q6PI97 169 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 HEPN1Q6WQI6 88 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 Q6ZSV7 163 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 RNF144BQ7Z419 303 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 RTN4RL2Q86UN3 420 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PDZD9Q8IXQ8 264 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 C8orf59Q8N0T1 100 aaPredicted RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 OR4S1Q8NGB4 309 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 CNIH3Q8TBE1 160 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 CYGBQ8WWM9 190 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 SMIM19Q96E16 107 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 RANBP3Q9H6Z4 567 aaPredicted RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 IFT22Q9H7X7 185 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 LINC00574Q9H8X3 128 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 EXOSC4Q9NPD3 245 aaKnown RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 TMEM138Q9NPI0 162 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PCDHB16Q9NRJ7 776 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 FKBP14Q9NWM8 211 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 CHCHD3Q9NX63 227 aaKnown RBP5.68□□□□□ -1.5
VPS50-218ENST00000485994 IL36GQ9NZH8 169 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 PSORS1C1Q9UIG5 152 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 GSTK1Q9Y2Q3 226 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 RNF114Q9Y508 228 aa5.68□□□□□ -1.5
VPS50-218ENST00000485994 A0A087X0M5 115 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 A0A1B0GX30 115 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 FAM90A22PA8MWA6 464 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 SLC33A1O00400 549 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 DEGS1O15121 323 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 ZNF780AO75290 641 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 CLIC3O95833 236 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 H2AFB1P0C5Y9 115 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 H2AFB2P0C5Z0 115 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 TMEM225BP0DP42 221 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 MYL12AP19105 171 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 OMGP23515 440 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 GABRR1P24046 479 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 DUSP1P28562 367 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 CD34P28906 385 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 PTGFRP43088 359 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 OR3A1P47881 315 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 KCNJ3P48549 501 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 P2RX3P56373 397 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 EDDM3BP56851 147 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 RPS11P62280 158 aaKnown RBP eCLIP5.67□□□□□ -1.5
VPS50-218ENST00000485994 SLC34A1Q06495 639 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 RIPK1Q13546 671 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 GPR50Q13585 617 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 LRRC36Q1X8D7 754 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 LRRC75BQ2VPJ9 315 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 Q499Y3 187 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 YIF1BQ5BJH7 314 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 OR2G6Q5TZ20 316 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 XAF1Q6GPH4 301 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 SLC35E4Q6ICL7 350 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 LAIR2Q6ISS4 152 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 SLC16A12Q6ZSM3 486 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 TCF23Q7RTU1 214 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 LINC00596Q86U02 117 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 PNKDQ8N490 385 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 NANOGP1Q8N7R0 232 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 ZNF565Q8N9K5 539 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 OR10A7Q8NGE5 316 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 C17orf50Q8WW18 174 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 WFDC12Q8WWY7 111 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 RGP1Q92546 391 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 THRSPQ92748 146 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 GHSRQ92847 366 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 TMEM106AQ96A25 262 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 CREB3L1Q96BA8 519 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 FOXRED1Q96CU9 486 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 MRPS24Q96EL2 167 aaKnown RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 BARHL1Q9BZE3 327 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 TMEM133Q9H2Q1 129 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 GAL3ST2Q9H3Q3 398 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 PAK1IP1Q9NWT1 392 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 CLEC2DQ9UHP7 191 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 PITPNC1Q9UKF7 332 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 FOXJ3Q9UPW0 622 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 SIRT4Q9Y6E7 314 aaPredicted RBP5.67□□□□□ -1.5
VPS50-218ENST00000485994 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
VPS50-218ENST00000485994 NOTCH3Q9UM47 2321 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms