RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 FOXB2Q5VYV0 432 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 HIST2H2BDQ6DRA6 164 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 BRD3OSQ6XYD6 125 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 KCTD8Q6ZWB6 473 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 C5orf24Q7Z6I8 188 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 OR8H2Q8N162 312 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 DYNAPQ8N1N2 210 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 GAPTQ8N292 157 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 TMEM86BQ8N661 226 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 OR5D13Q8NGL4 314 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 OR13C3Q8NGS6 347 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 OR13C9Q8NGT0 318 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 TBC1D15Q8TC07 691 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 ZNF418Q8TF45 676 aaPredicted RBP4.66□□□□□ -1.66
CUX1-208ENST00000485792 ST8SIA4Q92187 359 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 TMEM106AQ96A25 262 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 RFT1Q96AA3 541 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 DUX5Q96PT3 197 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 DERL3Q96Q80 235 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 OR5M11Q96RB7 305 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 C19orf24Q9BVV8 132 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 MEGF9Q9H1U4 602 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 VCXQ9H320 206 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 KCNK15Q9H427 330 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 METTL8Q9H825 291 aaKnown RBP4.66□□□□□ -1.66
CUX1-208ENST00000485792 ZMAT3Q9HA38 289 aaKnown RBP4.66□□□□□ -1.66
CUX1-208ENST00000485792 PLEKHA1Q9HB21 404 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 NOX4Q9NPH5 578 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 RBFOX1Q9NWB1 397 aaKnown RBP4.66□□□□□ -1.66
CUX1-208ENST00000485792 ZNRD1Q9P1U0 126 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 DNAJB11Q9UBS4 358 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 RAB26Q9ULW5 256 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 GTF2A1LQ9UNN4 478 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 FOXJ3Q9UPW0 622 aa4.66□□□□□ -1.66
CUX1-208ENST00000485792 TET2Q6N021 2002 aaPredicted RBP4.66□□□□□ -1.66
CUX1-208ENST00000485792 A0A087X0M5 115 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 TRAV24A0A0B4J272 114 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 A0A0G2JK05 382 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 A0A1B0GX30 115 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 NKX6-3A6NJ46 265 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 ODF3BA8MYP8 253 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 GABRPO00591 440 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 SPRY1O43609 319 aaPredicted RBP4.65□□□□□ -1.67
CUX1-208ENST00000485792 ANGPTL7O43827 346 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MRPS14O60783 128 aaKnown RBP4.65□□□□□ -1.67
CUX1-208ENST00000485792 NXPH2O95156 264 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MELTFP08582 738 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 HKR1P10072 659 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 CCL3L1P16619 93 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MYL12AP19105 171 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 RAB3AP20336 220 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 CFPP27918 469 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 PTGFRP43088 359 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 IER3P46695 156 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 OR3A1P47881 315 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 HSPA13P48723 471 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MTNR1BP49286 362 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 BMXP51813 675 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 KRTAP10-3P60369 221 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 RPL15P61313 204 aaKnown RBP4.65□□□□□ -1.67
CUX1-208ENST00000485792 RPL31P62899 125 aaKnown RBP4.65□□□□□ -1.67
CUX1-208ENST00000485792 COL10A1Q03692 680 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 PLA2G7Q13093 441 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 SPHARQ15513 63 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 SLC9A3R2Q15599 337 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 AANATQ16613 207 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 DEFB112Q30KQ8 113 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MIDNQ504T8 468 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 C1orf100Q5SVJ3 147 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 GPR157Q5UAW9 335 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 CD200R1LQ6Q8B3 271 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 TMEM91Q6ZNR0 172 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 AHSA2Q719I0 299 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 PRSS48Q7RTY5 328 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 VMO1Q7Z5L0 202 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 SIGLECL1Q8N7X8 197 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 CHST4Q8NCG5 386 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 BPIFB6Q8NFQ5 453 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 OR11H6Q8NGC7 330 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 OR5D18Q8NGL1 313 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 PIFOQ8TCI5 191 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 SLAMF9Q96A28 289 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 COQ2Q96H96 371 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 TMEM138Q9NPI0 162 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 TAS2R4Q9NYW5 299 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 DHDHQ9UQ10 334 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 MMP24Q9Y5R2 645 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 POMT1Q9Y6A1 747 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 LINC00312Q9Y6C7 94 aa4.65□□□□□ -1.67
CUX1-208ENST00000485792 DNAJC9-AS1A6NH13 148 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 RNF212BA8MTL3 300 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 VGLL3A8MV65 326 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 NPIPB11E5RHQ5 1161 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 SLC33A1O00400 549 aaPredicted RBP4.64□□□□□ -1.67
CUX1-208ENST00000485792 MGST3O14880 152 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 OR2H2O95918 312 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 HAND1O96004 215 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 CYB5AP00167 134 aa4.64□□□□□ -1.67
CUX1-208ENST00000485792 IGLV1-47P01700 117 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms