RNA–Protein interactions for RNA: ENST00000485247.1

PTPN4-210, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-210ENST00000485247 IGHV4OR15-8A0A075B7B6 117 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 A0A087WUU8 490 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 A0A087WW49 117 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 A0A0J9YWU9 116 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 TRPC5OSA6NMA1 111 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 OOSP1A8MZH6 123 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 LINC01619G3V211 115 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 LY6LH3BQJ8 138 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 UBDO15205 165 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 XRCC3O43542 346 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF737O75373 536 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 NXPH2O95156 264 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 RENP00797 406 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 NPSP0C0P6 89 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 CFL1P23528 166 aaKnown RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 CDK2P24941 298 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 HSD11B1P28845 292 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 PYCR1P32322 319 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 IFNA8P32881 189 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 SLC18A1P54219 525 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF121P58317 390 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ZP1P60852 638 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 STX3Q13277 289 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 SNCBQ16143 134 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 UTF1Q5T230 341 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 LCE1AQ5T7P2 110 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 DPY19L2P2Q6ZN68 376 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 TRAPPC6BQ86SZ2 158 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 FUNDC1Q8IVP5 155 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 SLC15A3Q8IY34 581 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 RNF113BQ8IZP6 322 aaKnown RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 PGAM4Q8N0Y7 254 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 OR8H2Q8N162 312 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 Q8N9P0 234 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 OR4K13Q8NH42 304 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 RP9Q8TA86 221 aaKnown RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 TOMM40LQ969M1 308 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 RPEQ96AT9 228 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 CREB3L1Q96BA8 519 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ZBTB9Q96C00 473 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 SLAMF6Q96DU3 332 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 SPDL1Q96EA4 605 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 PRRC1Q96M27 445 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ERMAPQ96PL5 475 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 OR52B2Q96RD2 323 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 GPX7Q96SL4 187 aaPredicted RBP4.03□□□□□ -1.76
PTPN4-210ENST00000485247 CHCHD6Q9BRQ6 235 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 FNDC11Q9BVV2 318 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ELOVL1Q9BW60 279 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 ZNF286AQ9HBT8 521 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 CCDC167Q9P0B6 97 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 BAG5Q9UL15 447 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 STUB1Q9UNE7 303 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
PTPN4-210ENST00000485247 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 FAM183AA6NL82 134 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 ZNF878C9JN71 531 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 J3KTA2 159 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RAB27BO00194 218 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 TXNDC12O95881 172 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 TFAP2AP05549 437 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 HIST1H1CP16403 213 aaKnown RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 SLC15A1P46059 708 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 HAAOP46952 286 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 PRRX1P54821 245 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 FXYD6P3P58550 94 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 MFGE8Q08431 387 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 DIAPH2-AS1Q14236 149 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 TRAM2Q15035 370 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 CEACAM21Q3KPI0 293 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 MORN5Q5VZ52 161 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 OR52W1Q6IF63 320 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 DLEU7Q6UYE1 221 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 MBOAT2Q6ZWT7 520 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 MOB3CQ70IA8 216 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RRM2BQ7LG56 351 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 PRSS45Q7RTY3 260 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 KCTD20Q7Z5Y7 419 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 TGIF2LXQ8IUE1 241 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 Q8N9W7 124 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 OR51L1Q8NGJ5 315 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 OR10A6Q8NH74 314 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 PHLDA1Q8WV24 401 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RGP1Q92546 391 aaPredicted RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RNF183Q96D59 192 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 PGAM5Q96HS1 289 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RITA1Q96K30 269 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 HSPB9Q9BQS6 159 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 CHST6Q9GZX3 395 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 TOLLIPQ9H0E2 274 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 RABEP2Q9H5N1 569 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 VIPAS39Q9H9C1 493 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 LIN7CQ9NUP9 197 aaKnown RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 CHCHD3Q9NX63 227 aaKnown RBP4.02□□□□□ -1.77
PTPN4-210ENST00000485247 NDE1Q9NXR1 346 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 WSB1Q9Y6I7 421 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 DSCAML1Q8TD84 2053 aa4.02□□□□□ -1.77
PTPN4-210ENST00000485247 VPS13DQ5THJ4 4388 aa4.01□□□□□ -1.77
PTPN4-210ENST00000485247 IGHV3-72A0A0B4J1Y9 119 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms