RNA–Protein interactions for RNA: ENST00000484799.1

SMC4-215, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 478 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-215ENST00000484799 BAZ2AQ9UIF9 1905 aaKnown RBP2.13□□□□□ -2.07
SMC4-215ENST00000484799 IGKV1-6A0A0C4DH72 117 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 MYBPHLA2RUH7 354 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 FAM183AA6NL82 134 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 C9J4A7 227 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 M0QXV9 152 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 RGS5O15539 181 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 CYTH3O43739 400 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 ENTPD6O75354 484 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 CBR3O75828 277 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 LIMS3P0CW19 117 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 LIMS4P0CW20 117 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 PET100P0DJ07 73 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 AKR1C4P17516 323 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 NTF3P20783 257 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 ACOT2P49753 483 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 STC1P52823 247 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 OR10A3P58181 314 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 RAB8AP61006 207 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 EXOC3L4Q17RC7 722 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 GOLGA7BQ2TAP0 167 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 ZNF678Q5SXM1 525 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 GLYATQ6IB77 296 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 MED27Q6P2C8 311 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 TPGS1Q6ZTW0 290 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 FA2HQ7L5A8 372 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 GALNT10Q86SR1 603 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 LINC00596Q86U02 117 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 STK40Q8N2I9 435 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 CCL17Q92583 94 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 DERL3Q96Q80 235 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 FAAP24Q9BTP7 215 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 MS4A8Q9BY19 250 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 SLC25A31Q9H0C2 315 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 MFSD1Q9H3U5 465 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 WDR54Q9H977 334 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 RHOFQ9HBH0 211 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 EURLQ9NYK6 297 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 RWDD2AQ9UIY3 292 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 C14orf166Q9Y224 244 aaKnown RBP2.13□□□□□ -2.07
SMC4-215ENST00000484799 RAD50Q92878 1312 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 VWA8A3KMH1 1905 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 MIA3Q5JRA6 1907 aa2.13□□□□□ -2.07
SMC4-215ENST00000484799 TRAV8-2A0A0B4J237 113 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 GOLGA6L10A6NI86 522 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 ITGB1BP1O14713 200 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 FFAR1O14842 300 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 AQP9O43315 295 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 PDCD6O75340 191 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 CXorf1O96002 111 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 IGHV1-46P01743 117 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 CD40LGP29965 261 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 SLC6A1P30531 599 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 CBX5P45973 191 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 IDH2P48735 452 aaKnown RBP2.12□□□□□ -2.07
SMC4-215ENST00000484799 ELF3P78545 371 aaPredicted RBP2.12□□□□□ -2.07
SMC4-215ENST00000484799 PRDX1Q06830 199 aaKnown RBP2.12□□□□□ -2.07
SMC4-215ENST00000484799 SP6Q3SY56 376 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 NIPAL1Q6NVV3 410 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 CLEC18BQ6UXF7 455 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 PRNTQ86SH4 94 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 C10orf107Q8IVU9 208 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 MIR7-3HGQ8N6C7 128 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 LFNGQ8NES3 379 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 RNASEH2CQ8TDP1 164 aaKnown RBP2.12□□□□□ -2.07
SMC4-215ENST00000484799 WDR34Q96EX3 536 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 FMC1Q96HJ9 113 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 ZNF514Q96K75 400 aaPredicted RBP2.12□□□□□ -2.07
SMC4-215ENST00000484799 PGLYRP3Q96LB9 341 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 ANAPC13Q9BS18 74 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 POMKQ9H5K3 350 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 INIPQ9NRY2 104 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 NKIRAS1Q9NYS0 192 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 ATP6V1DQ9Y5K8 247 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 LOXHD1Q8IVV2 1947 aa2.12□□□□□ -2.07
SMC4-215ENST00000484799 SETD1AO15047 1707 aaKnown RBP2.11□□□□□ -2.07
SMC4-215ENST00000484799 A0A0A6YYH2 397 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 TRAV8-3A0A0A6YYJ7 113 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 C1orf232A0A0U1RR37 186 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 A6NJ64 397 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 CEACAM18A8MTB9 384 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 SMLR1H3BR10 107 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 K7EPK0 472 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 SLC31A1O15431 190 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 CNMDO75829 334 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 CA2P00918 260 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 ORM1P02763 201 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 SOD3P08294 240 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 SEC11BP0C7V7 166 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 MLNP12872 115 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 PVALBP20472 110 aaPredicted RBP2.11□□□□□ -2.07
SMC4-215ENST00000484799 HLA-DMAP28067 261 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 PYCR1P32322 319 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 TGM4P49221 684 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 ZNHIT3Q15649 155 aaPredicted RBP2.11□□□□□ -2.07
SMC4-215ENST00000484799 TIMM23BQ5SRD1 257 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 TMEM215Q68D42 235 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 ZFAND6Q6FIF0 208 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 CASP12Q6UXS9 341 aa2.11□□□□□ -2.07
SMC4-215ENST00000484799 DGAT2L6Q6ZPD8 337 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms