RNA–Protein interactions for RNA: ENST00000484763.1

VCPKMT-203, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best)

Gene VCPKMT, Length 1,849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-203ENST00000484763 AP3S2P59780 193 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 DCDC5Q6ZRR9 648 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF295-AS1Q8N0V1 137 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 BPIFB2Q8N4F0 458 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 CD177Q8N6Q3 437 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 ANGPTL6Q8NI99 470 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 TAS2R8Q9NYW2 309 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF222Q9UK12 451 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 TBC1D24Q9ULP9 559 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 PPIAL4AQ9Y536 164 aa17.14■□□□□ 0.33
VCPKMT-203ENST00000484763 TRAV38-1A0A0B4J264 116 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 LINC00854A0A1B0GVQ3 168 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 CSF1P09603 554 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 RCVRNP35243 200 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 MDH2P40926 338 aaKnown RBP17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 COL10A1Q03692 680 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 STUMQ69YW2 141 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 SETD6Q8TBK2 473 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 IGFBPL1Q8WX77 278 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 CCL19Q99731 98 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 OCSTAMPQ9BR26 566 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 C12orf4Q9NQ89 552 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 ETAA1Q9NY74 926 aa17.13■□□□□ 0.33
VCPKMT-203ENST00000484763 ANKRD20A5PA0PJZ0 165 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 OVOL3O00110 214 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 TFF1P04155 84 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 COL8A2P25067 703 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 GABRA2P47869 451 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 ASAH1Q13510 395 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 KLF9Q13886 244 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 SHEQ5VZ18 495 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 PSMG3-AS1Q96PY0 264 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 HDHD3Q9BSH5 251 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 PPA2Q9H2U2 334 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF701Q9NV72 531 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 ANAPC10Q9UM13 185 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 PSPNO60542 156 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 RP2O75695 350 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 DAOP14920 347 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 GVQW1Q8N7I0 195 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 ASCC1Q8N9N2 400 aaKnown RBP17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 POC5Q8NA72 575 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 DEFB108BQ8NET1 73 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF107Q9UII5 783 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 METRNQ9UJH8 293 aa17.12■□□□□ 0.33
VCPKMT-203ENST00000484763 DOPEY2Q9Y3R5 2298 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 LYNX1G3V0Z9 82 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 LYNX1P0DP58 116 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 DTYMKP23919 212 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 RGS21Q2M5E4 152 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 COX4I2Q96KJ9 171 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 CHST6Q9GZX3 395 aa17.11■□□□□ 0.33
VCPKMT-203ENST00000484763 PLA2G10O15496 165 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 LY6HO94772 140 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 GYPAP02724 150 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 FCER2P06734 321 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 FCGR3AP08637 254 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 KCNJ3P48549 501 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 EFNA4P52798 201 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 TAS2R19P59542 299 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 BTG1P62324 171 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 DYRK1AQ13627 763 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 ATXN7L3Q14CW9 347 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 DEDD2Q8WXF8 326 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 SDSLQ96GA7 329 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 RIMS4Q9H426 269 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 CHMP1AQ9HD42 196 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 TMEM82A0PJX8 343 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 NKX6-3A6NJ46 265 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF737O75373 536 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 NAPSAO96009 420 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 F12P00748 615 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 OR3A1P47881 315 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 C17orf107Q6ZR85 190 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 PEG10Q86TG7 708 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 HOGA1Q86XE5 327 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF561Q8N587 486 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 TMEM229BQ8NBD8 167 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 PPP1R35Q8TAP8 253 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 C7orf50Q9BRJ6 194 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 DNTTIP1Q9H147 329 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF665Q9H7R5 613 aa17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF230Q9UIE0 474 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-203ENST00000484763 LYRM1O43325 122 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 FSTL3O95633 263 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 NAT1P18440 290 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 KCNJ8Q15842 424 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 ZNF788Q6ZQV5 615 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 OR4S1Q8NGB4 309 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 PLPPR1Q8TBJ4 325 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 SNAPC3Q92966 411 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 SNX22Q96L94 193 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 GAFA1Q96PS6 74 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 ST6GALNAC5Q9BVH7 336 aa17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 C11orf54Q9H0W9 315 aaPredicted RBP17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 MYOZ1Q9NP98 299 aaPredicted RBP17.09■□□□□ 0.33
VCPKMT-203ENST00000484763 CENPXA8MT69 81 aa17.08■□□□□ 0.33
VCPKMT-203ENST00000484763 H7C1Q1 480 aa17.08■□□□□ 0.33
VCPKMT-203ENST00000484763 CSN2P05814 226 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms