RNA–Protein interactions for RNA: ENST00000484476.5

LDLRAP1-205, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 1 (best)

Gene LDLRAP1, Length 657 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-205ENST00000484476 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 TMEM106AQ96A25 262 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 NKX3-1Q99801 234 aaPredicted RBP11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 CITED1Q99966 193 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 TMEM133Q9H2Q1 129 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 RANBP3Q9H6Z4 567 aaPredicted RBP11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 TMEM138Q9NPI0 162 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 TAS2R3Q9NYW6 316 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 IL36RNQ9UBH0 155 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF281Q9Y2X9 895 aa11.33□□□□□ -0.6
LDLRAP1-205ENST00000484476 ANK2Q01484 3957 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 A0A0G2JK05 382 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 EFCAB10A6NFE3 127 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 VGLL3A8MV65 326 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 LMO1P25800 156 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 C21orf33P30042 268 aaPredicted RBP11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 BRS3P32247 399 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 PTGFRP43088 359 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 OR3A1P47881 315 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 ETV1P50549 477 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 GTF2A1P52655 376 aaPredicted RBP11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 PROK1P58294 105 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 AESQ08117 197 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 PAN3Q58A45 887 aaKnown RBP11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF626Q68DY1 528 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 ASPHD2Q6ICH7 369 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 STX19Q8N4C7 294 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 C17orf50Q8WW18 174 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 AKR1E2Q96JD6 320 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 ING3Q9NXR8 418 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 ING4Q9UNL4 249 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 HILPDAQ9Y5L2 63 aa11.32□□□□□ -0.6
LDLRAP1-205ENST00000484476 IGHV2-26A0A0B4J1V2 119 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 IGKV1-12A0A0C4DH73 117 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ODAMA1E959 279 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 FAM90A8PA6NJQ4 464 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 H0YJX3 145 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF780AO75290 641 aaPredicted RBP11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 HTR3BO95264 441 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 CLIC3O95833 236 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 IGKV1D-12P01611 117 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ALDOBP05062 364 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 CSN2P05814 226 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 CDK2P24941 298 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF93P35789 620 aaPredicted RBP11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 TAS2R43P59537 309 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 SRSF4Q08170 494 aaKnown RBP11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ST3GAL4Q11206 333 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 CDK5R1Q15078 307 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 C2orf68Q2NKX9 166 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 OR2G6Q5TZ20 316 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ELP2Q6IA86 826 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 HEPN1Q6WQI6 88 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 LHFPL4Q7Z7J7 247 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ABHD12Q8N2K0 398 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 OR52N1Q8NH53 320 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 CORO2AQ92828 525 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 GHSRQ92847 366 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 METTL9Q9H1A3 318 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 MMP27Q9H306 513 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 DCLRE1BQ9H816 532 aa11.31□□□□□ -0.6
LDLRAP1-205ENST00000484476 ODF3BA8MYP8 253 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 LEUTXA8MZ59 168 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 MYL12BO14950 172 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 OGG1O15527 345 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 BDKRB2P30411 391 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 CAPGP40121 348 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 GLIPR1P48060 266 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 KCNJ3P48549 501 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 GPR176Q14439 515 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 YIF1BQ5BJH7 314 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 DDI2Q5TDH0 399 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 THRSPQ92748 146 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 SMIM19Q96E16 107 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF649Q9BS31 505 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 PRSS22Q9GZN4 317 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 TAS2R4Q9NYW5 299 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 DPM3Q9P2X0 92 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 ERGIC3Q9Y282 383 aa11.3□□□□□ -0.6
LDLRAP1-205ENST00000484476 MEIKINA0A087WXM9 373 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZNF729A6NN14 1252 aaPredicted RBP11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 SLC33A1O00400 549 aaPredicted RBP11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 HSPB6O14558 160 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 NFYBP25208 207 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 MNDAP41218 407 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 RAB13P51153 203 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 DYNLT3P51808 116 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 ZP1P60852 638 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 IL13RA2Q14627 380 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 ATXN7L3Q14CW9 347 aaPredicted RBP11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 HERPUD1Q15011 391 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 CCDC144NLQ6NUI1 221 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 AJUBAQ96IF1 538 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 CNOT2Q9NZN8 540 aaKnown RBP11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 TCF19Q9Y242 345 aa11.29□□□□□ -0.6
LDLRAP1-205ENST00000484476 GABRPO00591 440 aa11.28□□□□□ -0.6
LDLRAP1-205ENST00000484476 CSF1P09603 554 aa11.28□□□□□ -0.6
LDLRAP1-205ENST00000484476 VSIG10L2P0DP72 767 aa11.28□□□□□ -0.6
LDLRAP1-205ENST00000484476 GTF2F2P13984 249 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms