RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 K7EPK0 472 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PSMD12O00232 456 aaPredicted RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 MANBAO00462 879 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 SLC37A4O43826 429 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PLIN3O60664 434 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PDCD6O75340 191 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TRBV12-3P01733 135 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CD74P04233 296 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 HLA-DPB1P04440 258 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 SNRPAP09012 282 aaKnown RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CST2P09228 141 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 OR4Q2P0C623 313 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 IFI30P13284 250 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TAC1P20366 129 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PSMB1P20618 241 aaKnown RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 M6PRP20645 277 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 OMGP23515 440 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 G0S2P27469 103 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 SLC6A1P30531 599 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CCR7P32248 378 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TGFBR2P37173 567 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CDK9P50750 372 aaKnown RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 ZNF138P52744 262 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 DIO3P55073 304 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TCL1AP56279 114 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 H2BFSP57053 126 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CACNG7P62955 275 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 HIST1H3AP68431 136 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 H3F3AP84243 136 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TFAMQ00059 246 aaKnown RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 IHHQ14623 411 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 HERPUD1Q15011 391 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PMVKQ15126 192 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 IRF4Q15306 451 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PRSS8Q16651 343 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 C4orf26Q17RF5 130 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 ORMDL2Q53FV1 153 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TRIQKQ629K1 86 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 DHRS4L2Q6PKH6 230 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 SCGB1D4Q6XE38 83 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 DGAT2L6Q6ZPD8 337 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 RNF165Q6ZSG1 346 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 RFLNAQ6ZTI6 216 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 RASSF6Q6ZTQ3 369 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 HIST2H3AQ71DI3 136 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TMEM179BQ7Z7N9 219 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 LYG2Q86SG7 212 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TMEM61Q8N0U2 210 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 MUC15Q8N387 334 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 OR10G4Q8NGN3 311 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 ACTRT1Q8TDG2 376 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 RXFP4Q8TDU9 374 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 NEK7Q8TDX7 302 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 C7orf33Q8WU49 177 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 DCAKDQ8WVC6 231 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 KCTD4Q8WVF5 259 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 ASB17Q8WXJ9 295 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TMBIM1Q969X1 311 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 MARC2Q969Z3 335 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PPCDCQ96CD2 204 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 SMIM8Q96KF7 97 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TIPINQ9BVW5 301 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 DDA1Q9BW61 102 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 C6orf62Q9GZU0 229 aaPredicted RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 FBXL15Q9H469 300 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 CLMPQ9H6B4 373 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 NMNAT1Q9HAN9 279 aaPredicted RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 EDA2RQ9HAV5 297 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TAS2R7Q9NYW3 318 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 TAS2R5Q9NYW4 299 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PSG11Q9UQ72 335 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 KIF24Q5T7B8 1368 aa1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 PHF3Q92576 2039 aaKnown RBP1.95□□□□□ -2.1
LAPTM4A-202ENST00000483117 NFASCO94856 1347 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 NACAE9PAV3 2078 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 CHD4Q14839 1912 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 IGHV3-74A0A0B4J1X5 117 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 IGKV6-21A0A0C4DH24 114 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 A0A0J9YXY3 114 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 A0A1B0GV50 99 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 A0A1B0GXF2 115 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 RBFOX3A6NFN3 312 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 SMIM9A6NGZ8 99 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 UPK1AO00322 258 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 IFNA14P01570 189 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 IGKV1D-16P01601 117 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 HSPB1P04792 205 aaKnown RBP1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 HMGN1P05114 100 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 IL3P08700 152 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 GIPP09681 153 aaPredicted RBP1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 CECR9P0C854 216 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 CD79AP11912 226 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 SPNP16150 400 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 CRISP2P16562 243 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 NELFEP18615 380 aaKnown RBP1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 MDKP21741 143 aaPredicted RBP1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 PRTN3P24158 256 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 MIPP30301 263 aa1.94□□□□□ -2.1
LAPTM4A-202ENST00000483117 PMELP40967 661 aa1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms