RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 SLC33A1O00400 549 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 ZNF780AO75290 641 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 SC5DO75845 299 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 ARL6IP5O75915 188 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 VENTXO95231 258 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 IGHV1-69P01742 117 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 CCL3L1P16619 93 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 SRMP19623 302 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 PRTN3P24158 256 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 LMO1P25800 156 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 PSMB9P28065 219 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 GP2P55259 537 aaKnown RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 DLX1P56177 255 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 RBM11P57052 281 aaKnown RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 PRB3Q04118 309 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 MEF2CQ06413 473 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 KLRD1Q13241 179 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 ZNF273Q14593 569 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 SSX1Q16384 188 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 PIGYQ3MUY2 71 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 KCTD21Q4G0X4 260 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 PAN3Q58A45 887 aaKnown RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 UBE2UQ5VVX9 321 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 GLT8D1Q68CQ7 371 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 NCR3LG1Q68D85 454 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 GLIPR1L1Q6UWM5 242 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 TMEM91Q6ZNR0 172 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 C9orf139Q6ZV77 190 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 USP43Q70EL4 1123 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 LRRTM1Q86UE6 522 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 OSR2Q8N2R0 312 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 TPRX1Q8N7U7 411 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 Q8NFD4 153 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 OR4D6Q8NGJ1 314 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 OR51T1Q8NGJ9 327 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 FOXRED1Q96CU9 486 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 UQCC2Q9BRT2 126 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 ST3GAL6Q9Y274 331 aa7.2□□□□□ -1.26
SNX4-205ENST00000482965 SF3B6Q9Y3B4 125 aaKnown RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 SOX21Q9Y651 276 aaPredicted RBP7.2□□□□□ -1.26
SNX4-205ENST00000482965 ATRQ13535 2644 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 A0A1W2PP11 408 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 A0A1W2PRD5 423 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 A0A1W2PRF3 423 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 A0A1W2PRM7 423 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 RNASEK-C17orf49H0YIS7 233 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 CCRL2O00421 344 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 HSPB6O14558 160 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 OR7C1O76099 320 aaPredicted RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 ZNF728P0DKX0 622 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 GTF2F2P13984 249 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 CALRP27797 417 aaKnown RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 ERP29P30040 261 aaKnown RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 P2RX3P56373 397 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 HILS1P60008 231 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 ERVFRD-1P60508 538 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 FABP5Q01469 135 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 AESQ08117 197 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 ATXN7L3Q14CW9 347 aaPredicted RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 NHLRC3Q5JS37 347 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 KRBOX4Q5JUW0 171 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 METAP1DQ6UB28 335 aaPredicted RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 TRAPPC6BQ86SZ2 158 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 LINC00596Q86U02 117 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 TMEM158Q8WZ71 300 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 ZNF48Q96MX3 618 aaPredicted RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 ZNF714Q96N38 554 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 PPIL3Q9H2H8 161 aaKnown RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 HEXA-AS1Q9H8Q6 139 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 UNKLQ9H9P5 680 aaKnown RBP7.19□□□□□ -1.26
SNX4-205ENST00000482965 NDUFB11Q9NX14 153 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 ING3Q9NXR8 418 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 LINC00312Q9Y6C7 94 aa7.19□□□□□ -1.26
SNX4-205ENST00000482965 TRGV10A0A0A0MS01 117 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 TRAV24A0A0B4J272 114 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 MDFIC2A0A1B0GVS7 189 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 ODAMA1E959 279 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 C17orf98A8MV24 154 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 TRIM77I1YAP6 450 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 GEMIN2O14893 280 aaKnown RBP7.18□□□□□ -1.26
SNX4-205ENST00000482965 NPFFO15130 113 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 CRTAPO75718 401 aaPredicted RBP7.18□□□□□ -1.26
SNX4-205ENST00000482965 CSN2P05814 226 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 UBBP0CG47 229 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 MGMTP16455 207 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 COX7A1P24310 79 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 GLIPR1P48060 266 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 UBE2E1P51965 193 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 DLX6P56179 175 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 BAMBIQ13145 260 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 NEDD8Q15843 81 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 TAF9Q16594 264 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 MPV17LQ2QL34 196 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 DEFB112Q30KQ8 113 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 KRTAP24-1Q3LI83 254 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 C1orf100Q5SVJ3 147 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 ATAD3CQ5T2N8 411 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 ZNF782Q6ZMW2 699 aaPredicted RBP7.18□□□□□ -1.26
SNX4-205ENST00000482965 TCF23Q7RTU1 214 aa7.18□□□□□ -1.26
SNX4-205ENST00000482965 LYPD6Q86Y78 171 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms