RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 GP2P55259 537 aaKnown RBP13.62□□□□□ -0.23
HMGN1-214ENST00000482733 P2RX3P56373 397 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 HILS1P60008 231 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 SLC22A6Q4U2R8 563 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 GLIPR1L1Q6UWM5 242 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 LRRTM1Q86UE6 522 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 IFT22Q9H7X7 185 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 SIRT7Q9NRC8 400 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 NDUFB11Q9NX14 153 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 ST3GAL6Q9Y274 331 aa13.62□□□□□ -0.23
HMGN1-214ENST00000482733 CCRL2O00421 344 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 RBP4P02753 201 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 UBBP0CG47 229 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 SERPINA2P20848 420 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 GALP22466 123 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 RANBP1P43487 201 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 KCNJ3P48549 501 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 RBM11P57052 281 aaKnown RBP13.61□□□□□ -0.23
HMGN1-214ENST00000482733 FABP5Q01469 135 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 ZNF273Q14593 569 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 SSX1Q16384 188 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 MPV17LQ2QL34 196 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 PIGYQ3MUY2 71 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 BRD3OSQ6XYD6 125 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 BCL6BQ8N143 479 aaPredicted RBP13.61□□□□□ -0.23
HMGN1-214ENST00000482733 OR4D6Q8NGJ1 314 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 TMEM158Q8WZ71 300 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 TNFRSF14Q92956 283 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 PPIL3Q9H2H8 161 aaKnown RBP13.61□□□□□ -0.23
HMGN1-214ENST00000482733 LINC00312Q9Y6C7 94 aa13.61□□□□□ -0.23
HMGN1-214ENST00000482733 C17orf98A8MV24 154 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 ZNF728P0DKX0 622 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 CD37P11049 281 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 PSMB9P28065 219 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 UBE2E1P51965 193 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 ERVFRD-1P60508 538 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 PAN3Q58A45 887 aaKnown RBP13.6□□□□□ -0.23
HMGN1-214ENST00000482733 C1orf100Q5SVJ3 147 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 CD200R1LQ6Q8B3 271 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 SIGLECL1Q8N7X8 197 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 ZFAND2BQ8WV99 257 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 ZNF714Q96N38 554 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 CST11Q9H112 138 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 PPA2Q9H2U2 334 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 HEXA-AS1Q9H8Q6 139 aa13.6□□□□□ -0.23
HMGN1-214ENST00000482733 UBE2J1Q9Y385 318 aaPredicted RBP13.6□□□□□ -0.23
HMGN1-214ENST00000482733 TRGV10A0A0A0MS01 117 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 TRAV24A0A0B4J272 114 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 TRDV1A0A1B0GX56 115 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 RNASEK-C17orf49H0YIS7 233 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 H3BUI4 141 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 OR7C1O76099 320 aaPredicted RBP13.59□□□□□ -0.23
HMGN1-214ENST00000482733 TNFAIP8O95379 198 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 CCL3L1P16619 93 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 CALRP27797 417 aaKnown RBP13.59□□□□□ -0.23
HMGN1-214ENST00000482733 PSMD7P51665 324 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 KRBOX4Q5JUW0 171 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 RUSC1-AS1Q66K80 236 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 C11orf42Q8N5U0 333 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 BARHL1Q9BZE3 327 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 PRDM13Q9H4Q3 707 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 NCOR1P1Q9H4R4 102 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 ZMAT3Q9HA38 289 aaKnown RBP13.59□□□□□ -0.23
HMGN1-214ENST00000482733 SPACA1Q9HBV2 294 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 ATRQ13535 2644 aa13.59□□□□□ -0.23
HMGN1-214ENST00000482733 FAM90A10PA6NDY2 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A18PA6NE21 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A16PA6NEW6 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A20PA6NIJ5 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A8PA6NJQ4 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A7PA6NKC0 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A22PA8MWA6 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A12PA8MX19 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A5PA8MXJ8 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A23PA8MXZ1 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 TRIM77I1YAP6 450 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 GEMIN2O14893 280 aaKnown RBP13.58□□□□□ -0.24
HMGN1-214ENST00000482733 VENTXO95231 258 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A15PP0C7V4 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A13PP0C7W8 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A14PP0C7W9 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 FAM90A24PP0C7X0 464 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 HTR2CP28335 458 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 DLX6P56179 175 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 PAX5Q02548 391 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 AESQ08117 197 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 TRAPPC6BQ86SZ2 158 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 PDZD9Q8IXQ8 264 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 TPRX1Q8N7U7 411 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 OR6M1Q8NGM8 313 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 CORO2AQ92828 525 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 ZDHHC16Q969W1 377 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-214ENST00000482733 ZNF48Q96MX3 618 aaPredicted RBP13.58□□□□□ -0.24
HMGN1-214ENST00000482733 GAL3ST2Q9H3Q3 398 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 OR6C3Q9NZP0 311 aa13.58□□□□□ -0.24
HMGN1-214ENST00000482733 TRAV1-2A0A0B4J238 106 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 A0A1W2PP11 408 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 ODAMA1E959 279 aa13.57□□□□□ -0.24
HMGN1-214ENST00000482733 RNF212BA8MTL3 300 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms