RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 ODF3BA8MYP8 253 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 H0YJX3 145 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 SLC33A1O00400 549 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-213ENST00000482192 C21orf33P30042 268 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-213ENST00000482192 BDKRB2P30411 391 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF93P35789 620 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-213ENST00000482192 WNT4P56705 351 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 AESQ08117 197 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 DDI2Q5TDH0 399 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 ZNF626Q68DY1 528 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 Q6P435 159 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 OR13C5Q8NGS8 318 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 FOXRED1Q96CU9 486 aaPredicted RBP9.65□□□□□ -0.86
HMGN1-213ENST00000482192 PGLYRP3Q96LB9 341 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 FKBP14Q9NWM8 211 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 ERGIC3Q9Y282 383 aa9.65□□□□□ -0.86
HMGN1-213ENST00000482192 ODAMA1E959 279 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 FAM90A8PA6NJQ4 464 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 GPX5O75715 221 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 IGFBP3P17936 291 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 FSTP19883 344 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 PTGFRP43088 359 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 OR3A4PP47883 348 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 GLIPR1P48060 266 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 RPS11P62280 158 aaKnown RBP eCLIP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 DYNC1I2Q13409 638 aaKnown RBP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 IL13RA2Q14627 380 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 ATXN7L3Q14CW9 347 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 KRBOX4Q5JUW0 171 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 PRR31Q5SQ13 230 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 ASCL4Q6XD76 172 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 Q6ZSV7 163 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 LHFPL4Q7Z7J7 247 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 NANOGP1Q8N7R0 232 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 Q8NFD4 153 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 OR51T1Q8NGJ9 327 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 LINC01006Q8NI28 216 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 NRG4Q8WWG1 115 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 CORO2AQ92828 525 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 MALSU1Q96EH3 234 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 NR1H4Q96RI1 486 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 S100A13Q99584 98 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 CLEC7AQ9BXN2 247 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 TMEM133Q9H2Q1 129 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 C16orf95Q9H693 158 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 PAK1IP1Q9NWT1 392 aaPredicted RBP9.64□□□□□ -0.87
HMGN1-213ENST00000482192 TAS2R3Q9NYW6 316 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 IL36GQ9NZH8 169 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 RNF114Q9Y508 228 aa9.64□□□□□ -0.87
HMGN1-213ENST00000482192 IGHV2-26A0A0B4J1V2 119 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 PNMA8CA0A1B0GUJ8 204 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ERICH4A6NGS2 130 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ZNF780AO75290 641 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-213ENST00000482192 TSPAN9O75954 239 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 CDRT1O95170 752 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 HTR3BO95264 441 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 CSTBP04080 98 aaKnown RBP9.63□□□□□ -0.87
HMGN1-213ENST00000482192 CD1AP06126 327 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 CDK1P06493 297 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 CELP19835 753 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 AQP4P55087 323 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 BDH1Q02338 343 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 PIGYQ3MUY2 71 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 PAN3Q58A45 887 aaKnown RBP9.63□□□□□ -0.87
HMGN1-213ENST00000482192 C6orf141Q5SZD1 244 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 RNLSQ5VYX0 342 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 HEPN1Q6WQI6 88 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 LIAT1Q6ZQX7 453 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 OR10K1Q8NGX5 313 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 THRSPQ92748 146 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 MYDGFQ969H8 173 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ORAI1Q96D31 301 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 COQ2Q96H96 371 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ZNF184Q99676 751 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-213ENST00000482192 NKX3-1Q99801 234 aaPredicted RBP9.63□□□□□ -0.87
HMGN1-213ENST00000482192 MND1Q9BWT6 205 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 METTL9Q9H1A3 318 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 VCX3BQ9H321 246 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ZNF696Q9H7X3 374 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 SCN3BQ9NY72 215 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 OR6C3Q9NZP0 311 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 ING4Q9UNL4 249 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 TENM1Q9UKZ4 2725 aa9.63□□□□□ -0.87
HMGN1-213ENST00000482192 TRAV8-7A0A075B6U6 113 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 TRBV5-7A0A0A0MS05 114 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 TRAV24A0A0B4J272 114 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 PTGES3LE9PB15 166 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 HSPB6O14558 160 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 CDK2P24941 298 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 PAX6P26367 422 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 MAPK3P27361 379 aaPredicted RBP9.62□□□□□ -0.87
HMGN1-213ENST00000482192 KCNJ3P48549 501 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 PROK1P58294 105 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 FAM189A2Q15884 450 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 SSX2Q16385 188 aa9.62□□□□□ -0.87
HMGN1-213ENST00000482192 LY6EQ16553 131 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms