RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 CENPVL3A0A0U1RRI6 287 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 A0A1B0GTI1 187 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SMIM9A6NGZ8 99 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 D6RAR5 112 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SLC17A2O00624 439 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 APODP05090 189 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 EIF4EP06730 217 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 SNRPAP09012 282 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 CCDC166P0CW27 439 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 FUT3P21217 361 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 TSPOP30536 169 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 DLX1P56177 255 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 TAS2R39P59534 338 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PRR3P79522 188 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 CCNJQ5T5M9 372 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 GDPGP1Q6ZNW5 385 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 FAM92BQ6ZTR7 304 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 NFE4Q86UQ8 179 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR6V1Q8N148 313 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 MPLKIPQ8TAP9 179 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR51E1Q8TCB6 317 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 TCTEX1D2Q8WW35 142 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 TAF15Q92804 592 aaKnown RBP eCLIP2.52□□□□□ -2.01
SMC6-208ENST00000481708 CEP170P1Q96L14 293 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 FGFBP2Q9BYJ0 223 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PARLQ9H300 379 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 GID8Q9NWU2 228 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 HYDINQ4G0P3 5121 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 DNAH11Q96DT5 4516 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 TRABD2BA6NFA1 517 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 C12orf77C9JDV5 145 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SYNGR1O43759 233 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PATE4P0C8F1 98 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 ZSCAN5DPP0CG00 497 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 HIST1H1EP10412 219 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 HIST1H1CP16403 213 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 PPICP45877 212 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 FLOT2Q14254 428 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR5AK3PQ8NH89 298 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 RXFP2Q8WXD0 754 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 NEUROG1Q92886 237 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SMARCD1Q96GM5 515 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 ARL6Q9H0F7 186 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SIAEQ9HAT2 523 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 MIEF1Q9NQG6 463 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 EXOSC3Q9NQT5 275 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 CALYQ9NYX4 217 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 UVRAGQ9P2Y5 699 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 CD84Q9UIB8 345 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 F11RQ9Y624 299 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 NBASA2RRP1 2371 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 A0A1W2PS18 150 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR6C6A6NF89 314 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 FOXI3A8MTJ6 420 aaPredicted RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 FADS1O60427 444 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 POLQO75417 2590 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PRSS3P35030 304 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 RPL18AQ02543 176 aaKnown RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 PPP1R1AQ13522 171 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 CEACAM21Q3KPI0 293 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 ZNF718Q3SXZ3 478 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 SPIN4Q56A73 249 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 Q6ZS92 163 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 ZBTB8OSQ8IWT0 167 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 BBS7Q8IWZ6 715 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PNKDQ8N490 385 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 LINC00337Q8N6G1 96 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR11L1Q8NGX0 322 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 OR1P1Q8NH06 330 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PPCDCQ96CD2 204 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 MRAP2Q96G30 205 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PGLYRP3Q96LB9 341 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 ZNF597Q96LX8 424 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PITPNM3Q9BZ71 974 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 LINC00597Q9H2U6 94 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 PLGRKTQ9HBL7 147 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.52□□□□□ -2.01
SMC6-208ENST00000481708 XCL2Q9UBD3 114 aa2.52□□□□□ -2.01
SMC6-208ENST00000481708 CEACAM18A8MTB9 384 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 E9PLD3 99 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 LINC01619G3V211 115 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 DENRO43583 198 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 DUS4LO95620 317 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 AIFM1O95831 613 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 LALBAP00709 142 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SERPINA1P01009 418 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 CXCL8P10145 99 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 NQO1P15559 274 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 CCKARP32238 428 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 IDH3GP51553 393 aaPredicted RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 CDKN2DP55273 166 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 RUNX1Q01196 453 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SRSF6Q13247 344 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 TPTE2P1Q5T6R2 138 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 SFXN4Q6P4A7 337 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 Q6ZN92 141 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 MRPL52Q86TS9 123 aaKnown RBP2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR6T1Q8NGN1 323 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 OR2A12Q8NGT7 310 aa2.51□□□□□ -2.01
SMC6-208ENST00000481708 WFDC5Q8TCV5 224 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms