RNA–Protein interactions for RNA: ENST00000480961.1

CTSA-206, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 513 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-206ENST00000480961 LHX4Q969G2 390 aa16.73■□□□□ 0.27
CTSA-206ENST00000480961 FOXRED1Q96CU9 486 aaPredicted RBP16.73■□□□□ 0.27
CTSA-206ENST00000480961 OCEL1Q9H607 264 aa16.73■□□□□ 0.27
CTSA-206ENST00000480961 NUP50Q9UKX7 468 aa16.73■□□□□ 0.27
CTSA-206ENST00000480961 KPTNQ9Y664 436 aa16.73■□□□□ 0.27
CTSA-206ENST00000480961 MGST3O14880 152 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 ZNF780AO75290 641 aaPredicted RBP16.72■□□□□ 0.27
CTSA-206ENST00000480961 OR7C1O76099 320 aaPredicted RBP16.72■□□□□ 0.27
CTSA-206ENST00000480961 CD36P16671 472 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 OR10A3P58181 314 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 SRSF2Q01130 221 aaKnown RBP16.72■□□□□ 0.27
CTSA-206ENST00000480961 AESQ08117 197 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 IL13RA2Q14627 380 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 ATXN7L3Q14CW9 347 aaPredicted RBP16.72■□□□□ 0.27
CTSA-206ENST00000480961 RUSC1-AS1Q66K80 236 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 BRD3OSQ6XYD6 125 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 CMTM4Q8IZR5 234 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 SELENOIQ9C0D9 397 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 PCDHB16Q9NRJ7 776 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 TXNL4BQ9NX01 149 aaKnown RBP16.72■□□□□ 0.27
CTSA-206ENST00000480961 STUB1Q9UNE7 303 aa16.72■□□□□ 0.27
CTSA-206ENST00000480961 A0A1W2PRD5 423 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 A0A1W2PRF3 423 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 A0A1W2PRM7 423 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 SMIM30A4D0T7 59 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 SLC22A1O15245 554 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 GADD45AP24522 165 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 HTR2CP28335 458 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 GLIPR1P48060 266 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 CLDN12P56749 244 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 KLRD1Q13241 179 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 GPR176Q14439 515 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 PAN3Q58A45 887 aaKnown RBP16.71■□□□□ 0.27
CTSA-206ENST00000480961 TCF23Q7RTU1 214 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 KIR3DL3Q8N743 410 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 CHST4Q8NCG5 386 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 PPP1R35Q8TAP8 253 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 SLC6A7Q99884 636 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 CHCHD6Q9BRQ6 235 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 RNF167Q9H6Y7 350 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 PLGRKTQ9HBL7 147 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 SSR3Q9UNL2 185 aa16.71■□□□□ 0.27
CTSA-206ENST00000480961 LOC100506127A0A0U1RQW1 187 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 CENPVL3A0A0U1RRI6 287 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 MPIG6BO95866 241 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 CD37P11049 281 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 MGMTP16455 207 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 MYL9P24844 172 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 P2RX3P56373 397 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 RAB11BQ15907 218 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 NHLRC3Q5JS37 347 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 ATAD3CQ5T2N8 411 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 HES5Q5TA89 166 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 SUMF2Q8NBJ7 301 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 OR6M1Q8NGM8 313 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 SLC25A28Q96A46 364 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 COQ2Q96H96 371 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 CYYR1Q96J86 154 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 MS4A7Q9GZW8 240 aaPredicted RBP16.7■□□□□ 0.26
CTSA-206ENST00000480961 VCX3AQ9NNX9 186 aa16.7■□□□□ 0.26
CTSA-206ENST00000480961 DOCK11Q5JSL3 2073 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 TRAV1-2A0A0B4J238 106 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 M0R1W7 72 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 IFNA2P01563 188 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 SMIM18P0DKX4 95 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 VSIG8P0DPA2 414 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 GALP22466 123 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 BLMHQ13867 455 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 KRBOX4Q5JUW0 171 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 GPR157Q5UAW9 335 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 PNKDQ8N490 385 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 DPCDQ9BVM2 203 aaPredicted RBP16.69■□□□□ 0.26
CTSA-206ENST00000480961 V9GY05 133 aa16.69■□□□□ 0.26
CTSA-206ENST00000480961 hADV38S2A0JD32 116 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 TRIM64CA6NLI5 447 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 RNASEK-C17orf49H0YIS7 233 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 SLC17A2O00624 439 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 PDCD5O14737 125 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 FPR2P25090 351 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 DLX6P56179 175 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 ZNF782Q6ZMW2 699 aaPredicted RBP16.68■□□□□ 0.26
CTSA-206ENST00000480961 C11orf42Q8N5U0 333 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 PLPPR1Q8TBJ4 325 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 DMRTB1Q96MA1 342 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 METTL8Q9H825 291 aaKnown RBP16.68■□□□□ 0.26
CTSA-206ENST00000480961 GHRLQ9UBU3 117 aa16.68■□□□□ 0.26
CTSA-206ENST00000480961 TRAV39A0A0B4J263 110 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 IGHV1-69DA0A0B4J2H0 117 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 A0A1W2PPH5 198 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 IGHV1-69P01742 117 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 UBBP0CG47 229 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 ZNF728P0DKX0 622 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 JUNBP17275 347 aaPredicted RBP16.67■□□□□ 0.26
CTSA-206ENST00000480961 ERP29P30040 261 aaKnown RBP16.67■□□□□ 0.26
CTSA-206ENST00000480961 FGF9P31371 208 aaPredicted RBP16.67■□□□□ 0.26
CTSA-206ENST00000480961 MEF2CQ06413 473 aaPredicted RBP16.67■□□□□ 0.26
CTSA-206ENST00000480961 UNC119Q13432 240 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 C1orf122Q6ZSJ8 110 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 TRAPPC6BQ86SZ2 158 aa16.67■□□□□ 0.26
CTSA-206ENST00000480961 NR2C2APQ86WQ0 139 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms