RNA–Protein interactions for RNA: ENST00000480836.5

PTPN7-212, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,189 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-212ENST00000480836 LINC00482Q8N8I6 264 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 PP6455Q8WZ26 134 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 NOL4LQ96MY1 436 aaPredicted RBP10.54□□□□□ -0.72
PTPN7-212ENST00000480836 OPALINQ96PE5 141 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 ZNF649Q9BS31 505 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 COMMD4Q9H0A8 199 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 LINC00527Q9UJ94 153 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 OAZ3Q9UMX2 235 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 AP4S1Q9Y587 144 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 TSSC4Q9Y5U2 329 aaPredicted RBP10.54□□□□□ -0.72
PTPN7-212ENST00000480836 COL7A1Q02388 2944 aa10.54□□□□□ -0.72
PTPN7-212ENST00000480836 A0A087X0M5 115 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 A0A1B0GX30 115 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 SAC3D1A6NKF1 404 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 LEUTXA8MZ59 168 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 E9PI62 339 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 SH2D1BO14796 132 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 SNRNP70P08621 437 aaKnown RBP10.53□□□□□ -0.72
PTPN7-212ENST00000480836 PF4V1P10720 104 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 FASP25445 335 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 OR3A4PP47883 348 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 ZP1P60852 638 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 EGFEM1PQ0D2K5 195 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 ATXN7L3Q14CW9 347 aaPredicted RBP10.53□□□□□ -0.72
PTPN7-212ENST00000480836 DEFB121Q5J5C9 76 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 VAX1Q5SQQ9 334 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 MRPL41Q8IXM3 137 aaKnown RBP10.53□□□□□ -0.72
PTPN7-212ENST00000480836 ENTHD1Q8IYW4 607 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 OR8J1Q8NGP2 316 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 OR13A1Q8NGR1 328 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 OR13C9Q8NGT0 318 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 C10orf35Q96D05 121 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 PELI1Q96FA3 418 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 KIRREL1Q96J84 757 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 CYYR1Q96J86 154 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 PRRG3Q9BZD7 231 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 ISG20L2Q9H9L3 353 aaKnown RBP10.53□□□□□ -0.72
PTPN7-212ENST00000480836 EXOSC4Q9NPD3 245 aaKnown RBP10.53□□□□□ -0.72
PTPN7-212ENST00000480836 TAS2R3Q9NYW6 316 aa10.53□□□□□ -0.72
PTPN7-212ENST00000480836 TRAV24A0A0B4J272 114 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 A0A1W2PPE3 182 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 UBCP0CG48 685 aaKnown RBP10.52□□□□□ -0.73
PTPN7-212ENST00000480836 ATP6V1E1P36543 226 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 CDC42P60953 191 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 GABPB1Q06547 395 aaPredicted RBP10.52□□□□□ -0.73
PTPN7-212ENST00000480836 IL18R1Q13478 541 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 KPNB1Q14974 876 aaKnown RBP10.52□□□□□ -0.73
PTPN7-212ENST00000480836 C9orf152Q5JTZ5 239 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 TMEM244Q5VVB8 128 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 LHFPL2Q6ZUX7 228 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 RTN4RL2Q86UN3 420 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 Q8IYB0 196 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 CCDC54Q8NEL0 328 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 PLPPR1Q8TBJ4 325 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 MYRFQ9Y2G1 1151 aa10.52□□□□□ -0.73
PTPN7-212ENST00000480836 TRGV10A0A0A0MS01 117 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 A0A1W2PPI3 338 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 J3QLW9 94 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 HSPB6O14558 160 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 SLC16A6O15403 523 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 PF4P02776 101 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 CCDC159P0C7I6 412 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 ZNF44P15621 663 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 ZNF19P17023 458 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 PRKACBP22694 351 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 NFYBP25208 207 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 BRS3P32247 399 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 RBM39Q14498 530 aaKnown RBP10.51□□□□□ -0.73
PTPN7-212ENST00000480836 HNF4GQ14541 408 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 ZIK1Q3SY52 487 aaPredicted RBP10.51□□□□□ -0.73
PTPN7-212ENST00000480836 KRBOX4Q5JUW0 171 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 ZBTB49Q6ZSB9 765 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 C16orf82Q7Z2V1 217 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 LHFPL3Q86UP9 236 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 OSR2Q8N2R0 312 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 DRAM1Q8N682 238 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 RFESDQ8TAC1 157 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 ZNF596Q8TC21 504 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 CAPSLQ8WWF8 208 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 SPSB1Q96BD6 273 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 HRASLS5Q96KN8 279 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 DUX3Q96PT4 197 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 KIF25Q9UIL4 384 aa10.51□□□□□ -0.73
PTPN7-212ENST00000480836 RYR3Q15413 4870 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 KBTBD11-OT1A0A1B0GTJ5 212 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 DAPL1A0PJW8 107 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 J3QR06 171 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 DEGS1O15121 323 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 MT-ND2P03891 347 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 CSN2P05814 226 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 ZNF20P17024 532 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 GABRB1P18505 474 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 THBS3P49746 956 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 CCR9P51686 369 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 TMED1Q13445 227 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 ALKBH1Q13686 389 aaKnown RBP10.5□□□□□ -0.73
PTPN7-212ENST00000480836 LTC4SQ16873 150 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 OR52W1Q6IF63 320 aa10.5□□□□□ -0.73
PTPN7-212ENST00000480836 C8orf86Q6ZUL3 223 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms