RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 SCN1BQ07699 218 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 RAB11BQ15907 218 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 CHRFAM7AQ494W8 412 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 OR2W3Q7Z3T1 314 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 TMEM104Q8NE00 496 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 OR4S1Q8NGB4 309 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 Q96M66 194 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 CENPOQ9BU64 300 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 FBLN5Q9UBX5 448 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 STEAP1Q9UHE8 339 aa16.28■□□□□ 0.2
LIME1-205ENST00000480139 ANK3Q12955 4377 aaKnown RBP16.27■□□□□ 0.2
LIME1-205ENST00000480139 TRAV24A0A0B4J272 114 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 IFITM5A6NNB3 132 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 TMEM14DPA8MWL7 114 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 H3BUI4 141 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 AIPO00170 330 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 AIREO43918 545 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 TFAP2AP05549 437 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 MMP9P14780 707 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 ARSBP15848 533 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 ALDH3B2P48448 385 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 KCNJ3P48549 501 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 OR10A3P58181 314 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 MEF2CQ06413 473 aaPredicted RBP16.27■□□□□ 0.2
LIME1-205ENST00000480139 C1orf122Q6ZSJ8 110 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 CMTM4Q8IZR5 234 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 UPRTQ96BW1 309 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 CHST6Q9GZX3 395 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 SIRPDQ9H106 197 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 SPACA1Q9HBV2 294 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 C19orf12Q9NSK7 152 aa16.27■□□□□ 0.2
LIME1-205ENST00000480139 A0A1W2PPH5 198 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 A0A1W2PQ09 198 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 FUOMA2VDF0 154 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 M0R1W7 72 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 OR7C1O76099 320 aaPredicted RBP16.26■□□□□ 0.19
LIME1-205ENST00000480139 FSHBP01225 129 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 UNC119Q13432 240 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 METTL11BQ5VVY1 283 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 NR2C2APQ86WQ0 139 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 NANPQ8TBE9 248 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 WDFY2Q96P53 400 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 FUNDC2Q9BWH2 189 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 TMEM59Q9BXS4 323 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 SELENOIQ9C0D9 397 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 PPA2Q9H2U2 334 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 BANF2Q9H503 90 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 RCC2Q9P258 522 aaKnown RBP16.26■□□□□ 0.19
LIME1-205ENST00000480139 SVEP1Q4LDE5 3571 aa16.26■□□□□ 0.19
LIME1-205ENST00000480139 NOTOA8MTQ0 251 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 SDC2P34741 201 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 P2RX3P56373 397 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 EDDM3BP56851 147 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 RPS27AP62979 156 aaKnown RBP16.25■□□□□ 0.19
LIME1-205ENST00000480139 PDCD1Q15116 288 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 TAF9Q16594 264 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 PAN3Q58A45 887 aaKnown RBP16.25■□□□□ 0.19
LIME1-205ENST00000480139 HES5Q5TA89 166 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 TMEM200BQ69YZ2 307 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 FAM185AQ8N0U4 392 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 SUMF2Q8NBJ7 301 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 FAM46BQ96A09 425 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 FAM3DQ96BQ1 224 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 DPCDQ9BVM2 203 aaPredicted RBP16.25■□□□□ 0.19
LIME1-205ENST00000480139 TM2D1Q9BX74 207 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 NCOR1P1Q9H4R4 102 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 RNF167Q9H6Y7 350 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 ONECUT1Q9UBC0 465 aa16.25■□□□□ 0.19
LIME1-205ENST00000480139 NIPBLQ6KC79 2804 aaeCLIP16.24■□□□□ 0.19
LIME1-205ENST00000480139 hADV38S2A0JD32 116 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 TOX4O94842 621 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 MPIG6BO95866 241 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 GLAP06280 429 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 FAM157CP0CG43 387 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 SRD5A1P18405 259 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 ARF6P62330 175 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 EDDM3AQ14507 147 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 P2RY14Q15391 338 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 OR10K2Q6IF99 312 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 IL17RELQ6ZVW7 336 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 OR4M1Q8NGD0 313 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 OR51D1Q8NGF3 324 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 UNKLQ9H9P5 680 aaKnown RBP16.24■□□□□ 0.19
LIME1-205ENST00000480139 ZNF581Q9P0T4 197 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 LINC00312Q9Y6C7 94 aa16.24■□□□□ 0.19
LIME1-205ENST00000480139 NAV3Q8IVL0 2385 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 SETD2Q9BYW2 2564 aaPredicted RBP16.23■□□□□ 0.19
LIME1-205ENST00000480139 LDLRAD4O15165 306 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 TMEM127O75204 238 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 RBP4P02753 201 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 SRP14P37108 136 aaKnown RBP16.23■□□□□ 0.19
LIME1-205ENST00000480139 CLDN12P56749 244 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 BLMHQ13867 455 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 C2orf76Q3KRA6 126 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 ANKRD13BQ86YJ7 626 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 Q8N7P7 452 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 COQ2Q96H96 371 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 TBX15Q96SF7 602 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 BARHL1Q9BZE3 327 aa16.23■□□□□ 0.19
LIME1-205ENST00000480139 KCNK15Q9H427 330 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms