RNA–Protein interactions for RNA: ENST00000479339.5

CNKSR3-204, Transcript of CNKSR family member 3, humanhuman

TSL 1 (best) BASIC

Gene CNKSR3, Length 2,023 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-204ENST00000479339 EMP2P54851 167 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 COL9A2Q14055 689 aaPredicted RBP11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 NKAIN1Q4KMZ8 207 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 GRINAQ7Z429 371 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 GBGT1Q8N5D6 347 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 GNPNAT1Q96EK6 184 aaPredicted RBP11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 IMMP2LQ96T52 175 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF2Q9BSG1 426 aaPredicted RBP11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 R4GMQ9 66 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 PTPRQQ9UMZ3 2332 aa11.48□□□□□ -0.57
CNKSR3-204ENST00000479339 LAMA5O15230 3695 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 CTSDP07339 412 aaPredicted RBP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 SLC37A1P57057 533 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF74Q16587 644 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 LCN10Q6JVE6 187 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 PCSK4Q6UW60 755 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 FBXW12Q6X9E4 464 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF66Q6ZN08 573 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 PLXDC1Q8IUK5 500 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 C11orf42Q8N5U0 333 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 RNASE8Q8TDE3 154 aaKnown RBP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 TBL1XR1Q9BZK7 514 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 SDF2L1Q9HCN8 221 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 OCIAD1Q9NX40 245 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 NBEAQ8NFP9 2946 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 TRAV1-1A0A0B4J248 108 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 CRYM-AS1A6NIL9 109 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 NKX6-3A6NJ46 265 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 PITX3O75364 302 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 DIRAS3O95661 229 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 PPBPP02775 128 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 PNMTP11086 282 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 GALNSP34059 522 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 SFTPDP35247 375 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 RAB7AP51149 207 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF141Q15928 474 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 C1orf140Q5VVS0 124 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 FAM90A2PQ658T7 463 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 NUP54Q7Z3B4 507 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF440Q8IYI8 595 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ZNF100Q8IYN0 542 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 ORAOV1Q8WV07 137 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 HOXB13Q92826 284 aaPredicted RBP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 MRPL24Q96A35 216 aaKnown RBP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 TSPAN32Q96QS1 320 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 P2RX4Q99571 388 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 NRTNQ99748 197 aa11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 LMF2Q9BU23 707 aaKnown RBP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.47□□□□□ -0.57
CNKSR3-204ENST00000479339 HEATR5BQ9P2D3 2071 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 TRBV11-1A0A0K0K1C0 115 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 HCRTR2O43614 444 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 SELEP16581 610 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 ATP6V0CP27449 155 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 RPS27P42677 84 aaKnown RBP11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 PSG6Q00889 435 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 P2RY6Q15077 328 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 P4HA3Q7Z4N8 544 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 GPR119Q8TDV5 335 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 SERINC2Q96SA4 455 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 LPAR5Q9H1C0 372 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 CISD1Q9NZ45 108 aaKnown RBP11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 EHFQ9NZC4 300 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 B3GALT1Q9Y5Z6 326 aa11.46□□□□□ -0.57
CNKSR3-204ENST00000479339 IGKV1D-42A0A075B6H8 117 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ZNF732B4DXR9 585 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ST8SIA3O43173 380 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 SRSF10O75494 262 aaKnown RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 CBR3O75828 277 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 NXPH2O95156 264 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 PFN1P07737 140 aaKnown RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ASAH2BP0C7U1 165 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ELLP55199 621 aaPredicted RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 FOXK1P85037 733 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 TMEM183BQ1AE95 376 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ACTL10Q5JWF8 245 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 DCAF12Q5T6F0 453 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 RNF44Q7L0R7 432 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 SULF2Q8IWU5 870 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 ZFP62Q8NB50 900 aaPredicted RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 PTPMT1Q8WUK0 201 aaPredicted RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 C8orf44Q96CB5 159 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 GPR35Q9HC97 309 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 Q9N2K0 584 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 SERINC1Q9NRX5 453 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 LRP12Q9Y561 859 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 TMEM238LA0A1B0GVL6 79 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 H7C1C5 153 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 CIDEAO60543 219 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 OR6A2O95222 327 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 KNG1P01042 644 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 DUSP1P28562 367 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 CHRNB4P30926 498 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 GFERP55789 205 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 LCN6P62502 163 aa11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 CSNK2A1P68400 391 aaPredicted RBP11.45□□□□□ -0.58
CNKSR3-204ENST00000479339 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms