RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 C14orf79Q96F83 325 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 MAGT1Q9H0U3 335 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 RPS10P5Q9NQ39 176 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 IL17BQ9UHF5 180 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 STARD10Q9Y365 291 aa9.3□□□□□ -0.92
VPS52-217ENST00000478934 DNPH1O43598 174 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 PDCD6O75340 191 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 SCTP09683 121 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ACP1P24666 158 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 CLDN18P56856 261 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 MALLQ13021 153 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 CLINT1Q14677 625 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 PEA15Q15121 130 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 HPSE2Q8WWQ2 592 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 CPNE4Q96A23 557 aaPredicted RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 MSI2Q96DH6 328 aaKnown RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 C12orf57Q99622 126 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 C1QTNF5Q9BXJ0 243 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 EIF5A2Q9GZV4 153 aaKnown RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 TUBD1Q9UJT1 453 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 EDARQ9UNE0 448 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 LNP1A1A4G5 178 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 FAM157AC9JC47 383 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 SYNGR1O43759 233 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 PRH1P02810 166 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 DTYMKP23919 212 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ITGA3P26006 1051 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 PRDX4Q13162 271 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ARL6IP1Q15041 203 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 PPA1Q15181 289 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 FBXW12Q6X9E4 464 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 NUFIP2Q7Z417 695 aaKnown RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 SLC35G3Q8N808 338 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 SAT2Q96F10 170 aaPredicted RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 ABHD14AQ9BUJ0 271 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ZNF552Q9H707 407 aaPredicted RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 C12orf49Q9H741 205 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ZNF703Q9H7S9 590 aaPredicted RBP9.29□□□□□ -0.92
VPS52-217ENST00000478934 KCNIP3Q9Y2W7 256 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 FBXO7Q9Y3I1 522 aa9.29□□□□□ -0.92
VPS52-217ENST00000478934 ZNF98A6NK75 572 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TNFSF12O43508 249 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TSPAN15O95858 294 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 CD5P06127 495 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 PCBD1P61457 104 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 OR1C1Q15619 314 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 RIPPLY2Q5TAB7 128 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 SHEQ5VZ18 495 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TMEM182Q6ZP80 229 aaPredicted RBP9.28□□□□□ -0.92
VPS52-217ENST00000478934 C17orf78Q8N4C9 275 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 EXTL1Q92935 676 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 SPRY4Q9C004 299 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 MTCH1Q9NZJ7 389 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TRAV39A0A0B4J263 110 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 FAM24AA6NFZ4 105 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 COLCA2A8K830 154 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TAAR5O14804 337 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 ATXN7O15265 892 aaPredicted RBP9.28□□□□□ -0.92
VPS52-217ENST00000478934 GPR37O15354 613 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 JTBO76095 146 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 IGHEP01854 428 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 FUT3P21217 361 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 MPLP40238 635 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 CEBPGP53567 150 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 HIKESHIQ53FT3 197 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 SPIN3Q5JUX0 258 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 SPATA46Q5T0L3 261 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 RTL6Q6ICC9 239 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 C18orf12Q96KH6 178 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 TTTY12Q9BZ98 90 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 ZNF286AQ9HBT8 521 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 PARPBPQ9NWS1 579 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 CACFD1Q9UGQ2 172 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 LIPGQ9Y5X9 500 aa9.28□□□□□ -0.92
VPS52-217ENST00000478934 COL27A1Q8IZC6 1860 aaPredicted RBP9.27□□□□□ -0.92
VPS52-217ENST00000478934 IGKV1D-13A0A0B4J2D9 117 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 A0A1W2PR80 420 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 NKX2-6A6NCS4 301 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 ZNF732B4DXR9 585 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 M0R036 132 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 PPYP01298 95 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 ARG1P05089 322 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 OR13C7P0DN81 318 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 IGKV1-13P0DP09 117 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 GNRHRP30968 328 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 PPP1CCP36873 323 aaKnown RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 CAMLGP49069 296 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 SNRPEP62304 92 aaKnown RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 HERPUD1Q15011 391 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 AVPI1Q5T686 147 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 ABHD17BQ5VST6 288 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 EIF5AL1Q6IS14 154 aaKnown RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 C20orf204Q6ZNR8 217 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 LIAT1Q6ZQX7 453 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 MYPOPQ86VE0 399 aaPredicted RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 TMEM251Q8N6I4 163 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 UBALD1Q8TB05 177 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 TAAR9Q96RI9 348 aa9.27□□□□□ -0.93
VPS52-217ENST00000478934 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
VPS52-217ENST00000478934 SPACA1Q9HBV2 294 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms