RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 MOB4Q9Y3A3 225 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 HSPE1-MOB4S4R3N1 261 aa10.56□□□□□ -0.72
VCL-205ENST00000478896 ODAMA1E959 279 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 PSMB11A5LHX3 300 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 E9PQ18 207 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 BUB1B-PAK6H3BSN5 160 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 KDM4BO94953 1096 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 IGLV1-47P01700 117 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 HTR1AP08908 422 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 NFYBP25208 207 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 CD34P28906 385 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 HOXD3P31249 432 aaPredicted RBP10.55□□□□□ -0.72
VCL-205ENST00000478896 GDNFP39905 211 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 TMED1Q13445 227 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 C11orf87Q6NUJ2 197 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 OR13C9Q8NGT0 318 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 OR2G2Q8NGZ5 317 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 CORO2AQ92828 525 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 TOMM40LQ969M1 308 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 EME1Q96AY2 570 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 COMMD4Q9H0A8 199 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 INPP5EQ9NRR6 644 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 HHLA2Q9UM44 414 aa10.55□□□□□ -0.72
VCL-205ENST00000478896 IGKV1-12A0A0C4DH73 117 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 WI2-2373I1.2A0A1W2PRP0 233 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 DAPL1A0PJW8 107 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 ZNF729A6NN14 1252 aaPredicted RBP10.54□□□□□ -0.72
VCL-205ENST00000478896 HSPB6O14558 160 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 IGKV1D-12P01611 117 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 CSN2P05814 226 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 HCKP08631 526 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 FAM106CPP0CH98 169 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 FCGR1AP12314 374 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 POLR2IP36954 125 aaKnown RBP10.54□□□□□ -0.72
VCL-205ENST00000478896 GLP1RP43220 463 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 KRTAP10-11P60412 298 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 ISL1P61371 349 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 CD69Q07108 199 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 HES1Q14469 280 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 CHST4Q8NCG5 386 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 OR9G1Q8NH87 305 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 MBOAT4Q96T53 435 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 GABARAPL3Q9BY60 117 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 IMPAD1Q9NX62 359 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 OR6C3Q9NZP0 311 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 FRRS1LQ9P0K9 344 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 AMMECR1Q9Y4X0 333 aaPredicted RBP10.54□□□□□ -0.72
VCL-205ENST00000478896 AP4S1Q9Y587 144 aa10.54□□□□□ -0.72
VCL-205ENST00000478896 NUDT19A8MXV4 375 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 OOSP1A8MZH6 123 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 SLC33A1O00400 549 aaPredicted RBP10.53□□□□□ -0.72
VCL-205ENST00000478896 DEGS1O15121 323 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 AMY1AP04745 511 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 AMY2AP04746 511 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 ISG15P05161 165 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 SNRNP70P08621 437 aaKnown RBP10.53□□□□□ -0.72
VCL-205ENST00000478896 LMO1P25800 156 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 KCTD20Q7Z5Y7 419 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 ZNF329Q86UD4 541 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 LINC00482Q8N8I6 264 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 OR51A4Q8NGJ6 313 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 OR56B4Q8NH76 319 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 COQ2Q96H96 371 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 PPIL3Q9H2H8 161 aaKnown RBP10.53□□□□□ -0.72
VCL-205ENST00000478896 RHOFQ9HBH0 211 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 PCDHB16Q9NRJ7 776 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 DNAH3Q8TD57 4116 aa10.53□□□□□ -0.72
VCL-205ENST00000478896 A0A087X0M5 115 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 A0A1B0GX30 115 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 SLC16A6O15403 523 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 TMEM225BP0DP42 221 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 TMEM11P17152 192 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 NANOS3P60323 173 aaKnown RBP10.52□□□□□ -0.73
VCL-205ENST00000478896 LTC4SQ16873 150 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 C17orf58Q2M2W7 97 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 C1orf146Q5VVC0 180 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 SAXO1Q8IYX7 474 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 OR10AC1Q8NH08 325 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 CHPT1Q8WUD6 406 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 RNFT2Q96EX2 444 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 KIRREL1Q96J84 757 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 HRASLS5Q96KN8 279 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 C4orf36Q96KX1 117 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 ZCCHC4Q9H5U6 513 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 OAZ3Q9UMX2 235 aa10.52□□□□□ -0.73
VCL-205ENST00000478896 MEIKINA0A087WXM9 373 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 KBTBD11-OT1A0A1B0GTJ5 212 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 SAC3D1A6NKF1 404 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 SERPINE3A8MV23 424 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 H0YJX3 145 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 LY6LH3BQJ8 138 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 J3QLW9 94 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 IGHV3-7P01780 117 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 MT-ND2P03891 347 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 CCDC159P0C7I6 412 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 DBTP11182 482 aaKnown RBP10.51□□□□□ -0.73
VCL-205ENST00000478896 ZNF19P17023 458 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 GNG10P50151 68 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 CCR9P51686 369 aa10.51□□□□□ -0.73
VCL-205ENST00000478896 RPL23AP62750 156 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms