RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 ZNF836Q6ZNA1 936 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 RTL4Q6ZR62 310 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPS19BP1Q86WX3 136 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CYP4Z2PQ8N1L4 340 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZFP62Q8NB50 900 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 DRAXINQ8NBI3 349 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF675Q8TD23 568 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 RNF138Q8WVD3 245 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 TSEN15Q8WW01 171 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ITFG2Q969R8 447 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 AURKBQ96GD4 344 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 FAM210BQ96KR6 192 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 OSBPL10Q9BXB5 764 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 VCX3BQ9H321 246 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 HEATR1Q9H583 2144 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ANKRA2Q9H9E1 313 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 VCX3AQ9NNX9 186 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CTPS2Q9NRF8 586 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 FGFR1OP2Q9NVK5 253 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 NKIRAS1Q9NYS0 192 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC25A37Q9NYZ2 338 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 AHSPQ9NZD4 102 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 SHPKQ9UHJ6 478 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF223Q9UK11 482 aaPredicted RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CFL2Q9Y281 166 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 TRAPPC4Q9Y296 219 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF835Q9Y2P0 537 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 YARS2Q9Y2Z4 477 aaKnown RBP2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 GMEB1Q9Y692 573 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 DSCAMO60469 2012 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 COL12A1Q99715 3063 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 CRYBG3Q68DQ2 2970 aa2.64□□□□□ -1.99
CDC42BPA-212ENST00000478573 MAST4O15021 2626 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 RELNP78509 3460 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 SMIM31A0A1B0GVY4 71 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 H0YJX3 145 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 H3BNH8 94 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 KLRC4-KLRK1H3BQV0 150 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 RAB29O14966 203 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ACOX3O15254 700 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 CHST1O43916 411 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 CCDC22O60826 627 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 FKBP6O75344 327 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR2J3O76001 311 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ETHE1O95571 254 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 AIFM1O95831 613 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 C6orf47O95873 294 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 MYL2P10916 166 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 RRM2P31350 389 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 SERPINB5P36952 375 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 AQP2P41181 271 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 DNAJB13P59910 316 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 BTG2P78543 158 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 STX4Q12846 297 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLAMF1Q13291 335 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ART3Q13508 389 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 AQP6Q13520 282 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 TRMT5Q32P41 509 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 FBXO48Q5FWF7 155 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 TTC19Q6DKK2 380 aaPredicted RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 LCN12Q6JVE5 192 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 SLC48A1Q6P1K1 146 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF621Q6ZSS3 439 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 COMMD6Q7Z4G1 85 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 BIVMQ86UB2 503 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 LRRC34Q8IZ02 419 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 LIX1Q8N485 282 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 KIF2BQ8N4N8 673 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM156Q8N614 296 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR7G1Q8NGA0 311 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF721Q8TF20 911 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 C19orf60Q96EN9 201 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 PIK3IP1Q96FE7 263 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 TSC22D3Q99576 134 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 PAIP2Q9BPZ3 127 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR51B5Q9H339 312 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 OR51M1Q9H341 326 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 CENPHQ9H3R5 247 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ELOVL6Q9H5J4 265 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 EXO5Q9H790 373 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 RPF2Q9H7B2 306 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 FGF20Q9NP95 211 aaPredicted RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ZNF226Q9NYT6 803 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 STMN3Q9NZ72 180 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM216Q9P0N5 145 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 STX18Q9P2W9 335 aaKnown RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 PITPNC1Q9UKF7 332 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 BOKQ9UMX3 212 aaPredicted RBP2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 RNF11Q9Y3C5 154 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 ASB4Q9Y574 426 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 COMMD3-BMI1R4GMX3 469 aa2.63□□□□□ -1.99
CDC42BPA-212ENST00000478573 YLPM1P49750 1951 aaKnown RBP2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 TANC2Q9HCD6 1990 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 ITPR2Q14571 2701 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 IGHV3-64DA0A0J9YX35 117 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 TMEM120BA0PK00 339 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 ANKRD65E5RJM6 399 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 MANBAO00462 879 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 COPEO14579 308 aa2.62□□□□□ -1.99
CDC42BPA-212ENST00000478573 XKRYO14609 159 aa2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms