RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 PLCZ1Q86YW0 608 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 TBC1D19Q8N5T2 526 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 ZDHHC22Q8N966 263 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 LY6G5BQ8NDX9 201 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 OR7G1Q8NGA0 311 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 OR10Z1Q8NGY1 313 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 GPX8Q8TED1 209 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 GLYATL2Q8WU03 294 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 TMEM234Q8WY98 164 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 NAT6Q93015 286 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 SMARCD1Q96GM5 515 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 RNF170Q96K19 258 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 PEBP4Q96S96 227 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 CHID1Q9BWS9 393 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 PORCNQ9H237 461 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 OR51B5Q9H339 312 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 OR51B6Q9H340 312 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 CHRAC1Q9NRG0 131 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 NKIRAS1Q9NYS0 192 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 TAS2R7Q9NYW3 318 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 ATG2BQ96BY7 2078 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 POLR3AO14802 1390 aaPredicted RBP1.31□□□□□ -2.2
VPS50-213ENST00000477572 CPDO75976 1380 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 JCADQ9P266 1359 aa1.31□□□□□ -2.2
VPS50-213ENST00000477572 NPHP4O75161 1426 aaPredicted RBP1.31□□□□□ -2.2
VPS50-213ENST00000477572 LCTP09848 1927 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TRPM6Q9BX84 2022 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 A0A1B0GW15 77 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 FUOMA2VDF0 154 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 SMLR1H3BR10 107 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TOR1AO14656 332 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ITGB1BP1O14713 200 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 KDELR3O43731 214 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ENTPD6O75354 484 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CPSF4O95639 269 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 SNAI1O95863 264 aaPredicted RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 GCGP01275 180 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 PRB1P04280 392 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 IGKV1-16P04430 117 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 FABP1P07148 127 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 OR4Q2P0C623 313 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 RD3LP0DJH9 198 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 COX5BP10606 129 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 IFI30P13284 250 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 IL12BP29460 328 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CDKN2CP42773 168 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 SERPINB9P50453 376 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 PSMD4P55036 377 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 MLF1P58340 268 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TAS2R39P59534 338 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 RAB11AP62491 216 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 LCN2P80188 198 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 S100A12P80511 92 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 IL5RAQ01344 420 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 C2orf54Q08AI8 447 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 LAMTOR4Q0VGL1 99 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 STX5Q13190 355 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 STX3Q13277 289 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 PMVKQ15126 192 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 USF2Q15853 346 aaPredicted RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 RAB11BQ15907 218 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 FBXL19-AS1Q494R0 122 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ACTBL2Q562R1 376 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TTC33Q6PID6 262 aaPredicted RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 MRPL21Q7Z2W9 205 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 PRNTQ86SH4 94 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 SLC51BQ86UW2 128 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 RBM45Q8IUH3 476 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 FAM58AQ8N1B3 248 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TCP10LQ8TDR4 215 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 BAALCQ8WXS3 180 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 OR8D1Q8WZ84 308 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 YIPF5Q969M3 257 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CCDC127Q96BQ5 260 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CERS2Q96G23 380 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ZNF75AQ96N20 296 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CGREF1Q99674 301 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 MRPL20Q9BYC9 149 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 DERL2Q9GZP9 239 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 DRC3Q9H069 523 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 FAM107BQ9H098 131 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 RAB1BQ9H0U4 201 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 OR52A5Q9H2C5 316 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 OR51V1Q9H2C8 321 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CENPHQ9H3R5 247 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 GOLPH3Q9H4A6 298 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ARMC7Q9H6L4 198 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 WDR55Q9H6Y2 383 aaPredicted RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 ABCB9Q9NP78 766 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 C12orf4Q9NQ89 552 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 CLEC2DQ9UHP7 191 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 NAGKQ9UJ70 344 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 PAIP2BQ9ULR5 123 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 AP3M1Q9Y2T2 418 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ACOT9Q9Y305 439 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ORC6Q9Y5N6 252 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ICOSQ9Y6W8 199 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 TAF1LQ8IZX4 1826 aa1.3□□□□□ -2.2
VPS50-213ENST00000477572 ROCK2O75116 1388 aaKnown RBP1.3□□□□□ -2.2
VPS50-213ENST00000477572 PLB1Q6P1J6 1458 aa1.3□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 141.7 ms