RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 SDSLQ96GA7 329 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 GFI1Q99684 422 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 PLGRKTQ9HBL7 147 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 TNFRSF19Q9NS68 423 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 CCDC59Q9P031 241 aaKnown RBP14.49□□□□□ -0.09
PTPN7-209ENST00000477554 IGKV1-12A0A0C4DH73 117 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 A0A0G2JK05 382 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 SMIM30A4D0T7 59 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 IFITM5A6NNB3 132 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 SLC17A2O00624 439 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 NXPH2O95156 264 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 IGKV1D-12P01611 117 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 ZNF182P17025 639 aaPredicted RBP14.49□□□□□ -0.09
PTPN7-209ENST00000477554 CFPP27918 469 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 PRDX2P32119 198 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 CAV3P56539 151 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 SLC9A3R2Q15599 337 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 C1orf100Q5SVJ3 147 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 METTL11BQ5VVY1 283 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 NR2C2APQ86WQ0 139 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 OR4M1Q8NGD0 313 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 OR6M1Q8NGM8 313 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 C8orf46Q8TAG6 207 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 DCUN1D5Q9BTE7 237 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 DNTTIP1Q9H147 329 aa14.49□□□□□ -0.09
PTPN7-209ENST00000477554 RBFOX1Q9NWB1 397 aaKnown RBP14.49□□□□□ -0.09
PTPN7-209ENST00000477554 RNASEK-C17orf49H0YIS7 233 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 ANGPTL7O43827 346 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 ECDO95905 644 aaPredicted RBP14.48□□□□□ -0.09
PTPN7-209ENST00000477554 BCL3P20749 454 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 DUSP1P28562 367 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 POU3F4P49335 361 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 CAPZA1P52907 286 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 IL24Q13007 206 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 BAMBIQ13145 260 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 CNPY1Q3B7I2 92 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 LYPD6Q86Y78 171 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 OR5D18Q8NGL1 313 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 FAM216AQ8WUB2 273 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 AP3S1Q92572 193 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 TNFRSF14Q92956 283 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 PKIBQ9C010 78 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 STEAP1Q9UHE8 339 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 DAPK2Q9UIK4 370 aa14.48□□□□□ -0.09
PTPN7-209ENST00000477554 IGHV1-69DA0A0B4J2H0 117 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 A0A0U1RQK1 487 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 HOXA3O43365 443 aaPredicted RBP14.47□□□□□ -0.09
PTPN7-209ENST00000477554 IGHV1-69P01742 117 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 LIPFP07098 398 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 PAX6P26367 422 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 HTR2CP28335 458 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 PTGFRP43088 359 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 SNU13P55769 128 aaKnown RBP14.47□□□□□ -0.09
PTPN7-209ENST00000477554 SCGB2A2Q13296 93 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 RAB11BQ15907 218 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 SMIM21Q3B7S5 101 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 IDNKQ5T6J7 187 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 GPR157Q5UAW9 335 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 HCP5Q6MZN7 132 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 C17orf50Q8WW18 174 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 KCTD12Q96CX2 325 aaKnown RBP14.47□□□□□ -0.09
PTPN7-209ENST00000477554 MED30Q96HR3 178 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 S100A13Q99584 98 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 BARHL1Q9BZE3 327 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 RASL12Q9NYN1 266 aa14.47□□□□□ -0.09
PTPN7-209ENST00000477554 TMEM82A0PJX8 343 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 CYB5AP00167 134 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 ACTG1P63261 375 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 COL10A1Q03692 680 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 PDZK1IP1Q13113 114 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 ZNF273Q14593 569 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 HES5Q5TA89 166 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 MKXQ8IYA7 352 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 FAM185AQ8N0U4 392 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 C11orf42Q8N5U0 333 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 ZSCAN4Q8NAM6 433 aaPredicted RBP14.46□□□□□ -0.09
PTPN7-209ENST00000477554 TNFAIP8L1Q8WVP5 186 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 ACOT12Q8WYK0 555 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 CEP19Q96LK0 163 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 GHRLQ9UBU3 117 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 POLDIP2Q9Y2S7 368 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 KPTNQ9Y664 436 aa14.46□□□□□ -0.09
PTPN7-209ENST00000477554 TRIM77I1YAP6 450 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 UBBP0CG47 229 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 TMEM225BP0DP42 221 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 CCL3L1P16619 93 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 PRTN3P24158 256 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 SCAND1P57086 179 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 ZP1P60852 638 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 DYNC1I2Q13409 638 aaKnown RBP14.45□□□□□ -0.1
PTPN7-209ENST00000477554 AWAT2Q6E213 333 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 SAXO1Q8IYX7 474 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 OR4D6Q8NGJ1 314 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 LIN7BQ9HAP6 207 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 ABRACLQ9P1F3 81 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 MRPS28Q9Y2Q9 187 aaKnown RBP14.45□□□□□ -0.1
PTPN7-209ENST00000477554 DSCAML1Q8TD84 2053 aa14.45□□□□□ -0.1
PTPN7-209ENST00000477554 A0A1W2PQ09 198 aa14.44□□□□□ -0.1
PTPN7-209ENST00000477554 ZNF737O75373 536 aa14.44□□□□□ -0.1
PTPN7-209ENST00000477554 SLC2A2P11168 524 aaPredicted RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms