RNA–Protein interactions for RNA: ENST00000477085.1

COL4A6-206, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,784 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-206ENST00000477085 SCGB2B2Q4G0G5 96 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 OR5AP2Q8NGF4 316 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 GHITMQ9H3K2 345 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 C12orf4Q9NQ89 552 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 DCAF16Q9NXF7 216 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 CISD1Q9NZ45 108 aaKnown RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 OR14J1Q9UGF5 321 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ANXA10Q9UJ72 324 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 METRNQ9UJH8 293 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ICE1Q9Y2F5 2266 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 CHD3Q12873 2000 aaKnown RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 HAND1O96004 215 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 LMO1P25800 156 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 MECP2P51608 486 aaKnown RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 RAG2P55895 527 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 CCL8P80075 99 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 RBMS2Q15434 407 aaKnown RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF672Q499Z4 452 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 SPIN3Q5JUX0 258 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 FAM201AQ5SY85 155 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 OVCH2Q7RTZ1 564 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 OR5T2Q8NGG2 359 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 PLPPR1Q8TBJ4 325 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 LIME1Q9H400 295 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 SPACA1Q9HBV2 294 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ZNF221Q9UK13 617 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 PLEKHA6Q9Y2H5 1048 aa12.15□□□□□ -0.46
COL4A6-206ENST00000477085 HRNRQ86YZ3 2850 aaPredicted RBP12.15□□□□□ -0.46
COL4A6-206ENST00000477085 ROS1P08922 2347 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 ANKHD1Q8IWZ3 2542 aaKnown RBP12.14□□□□□ -0.47
COL4A6-206ENST00000477085 LRBAP50851 2863 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 C7orf66A4D0T2 115 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 RFPL4AA6NLU0 287 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 DISC1C4P0D8 188 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 RFPL4AL1F8VTS6 287 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 SH2D1BO14796 132 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 TPD52L2O43399 206 aaKnown RBP12.14□□□□□ -0.47
COL4A6-206ENST00000477085 PEX14O75381 377 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF205O95201 554 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 HPXP02790 462 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 CD55P08174 381 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 RNF224P0DH78 156 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 VSIG10L2P0DP72 767 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 EFNB3Q15768 340 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 SLC36A1Q7Z2H8 476 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 CD177Q8N6Q3 437 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 OR5H2Q8NGV7 314 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
COL4A6-206ENST00000477085 GIMAP1Q8WWP7 306 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 EDARQ9UNE0 448 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 VSIG4Q9Y279 399 aa12.14□□□□□ -0.47
COL4A6-206ENST00000477085 IGHV3OR15-7A0A075B7D8 119 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 M0R233 179 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 KNG1P01042 644 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 GLAP06280 429 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 GSTT2P0CG29 244 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 PSG2P11465 335 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 SWI5Q1ZZU3 235 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 Q8TCH9 128 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 TMEM165Q9HC07 324 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 Q9N2K0 584 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 RASL12Q9NYN1 266 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 RALYQ9UKM9 306 aaKnown RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 FLNCQ14315 2725 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 IGKV1D-17A0A075B6S4 117 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 TMEM82A0PJX8 343 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 VSTM5A8MXK1 200 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 DHFRP00374 187 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 TAS2R46P59540 309 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 CHRFAM7AQ494W8 412 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 ACTBL2Q562R1 376 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 PAN3Q58A45 887 aaKnown RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 ATPAF1Q5TC12 328 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 AADACL3Q5VUY0 350 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 ZNF660Q6AZW8 331 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 C17orf107Q6ZR85 190 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 LHFPL1Q86WI0 220 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 NEK7Q8TDX7 302 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 PRRT1Q99946 306 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 DHRS9Q9BPW9 319 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 SLC25A21Q9BQT8 299 aaPredicted RBP12.13□□□□□ -0.47
COL4A6-206ENST00000477085 PPA2Q9H2U2 334 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 EHFQ9NZC4 300 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 SCP2D1Q9UJQ7 156 aa12.13□□□□□ -0.47
COL4A6-206ENST00000477085 TRAV39A0A0B4J263 110 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 HMX3A6NHT5 357 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 IFNA6P05013 189 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 IGFBP2P18065 325 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 RCC1P18754 421 aaPredicted RBP12.12□□□□□ -0.47
COL4A6-206ENST00000477085 TNFSF4P23510 183 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 PRDX2P32119 198 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 OR3A3P47888 321 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 CDK10Q15131 360 aa12.12□□□□□ -0.47
COL4A6-206ENST00000477085 SMIM21Q3B7S5 101 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms