RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 CCL28Q9NRJ3 127 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 FOXJ2Q9P0K8 574 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 MIOXQ9UGB7 285 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TNFSF18Q9UNG2 199 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 HS3ST3A1Q9Y663 406 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NAV3Q8IVL0 2385 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 C7orf77A4D0Y5 90 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 LINC01387J3KSC0 135 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ACTL6BO94805 426 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 IL5P05113 134 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 CHRNA7P36544 502 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 CCL11P51671 97 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 LINC00205P59089 165 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 BAXQ07812 192 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF684Q5T5D7 378 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SPICQ8N5J4 248 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 LHFPL5Q8TAF8 219 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 HGDQ93099 445 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SPACA9Q96E40 222 aaPredicted RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 C2orf50Q96LR7 162 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 FAM103A1Q9BTL3 118 aaKnown RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 C12orf10Q9HB07 376 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PATZ1Q9HBE1 687 aaKnown RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TRAV34A0A0B4J273 112 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1W2PNV4 684 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 J3QRE1 110 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ENSAO43768 121 aaKnown RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NXPH2O95156 264 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SCTP09683 121 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 AADACP22760 399 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PTGER4P35408 488 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 P2RY4P51582 365 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PNLIPRP2P54317 469 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TMEM50BP56557 158 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TAS2R31P59538 309 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PHYHD1Q5SRE7 291 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 SLC36A1Q7Z2H8 476 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 TIPARPQ7Z3E1 657 aaKnown RBP4.35□□□□□ -1.71
CCDC39-204ENST00000476379 MKXQ8IYA7 352 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 NKAIN3Q8N8D7 197 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 ADPRHL1Q8NDY3 354 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PIK3IP1Q96FE7 263 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 PECRQ9BY49 303 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 RASL12Q9NYN1 266 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 HIVEP3Q5T1R4 2406 aa4.35□□□□□ -1.71
CCDC39-204ENST00000476379 A0A1B0GTQ1 180 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 A6NCN8 305 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 LIPT2A6NK58 231 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SHOXO15266 292 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 EIF4E2O60573 245 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 CYTIPO60759 359 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SYNGR4O95473 234 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 NGFP01138 241 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 CELA3AP09093 270 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 RFPL3SP0C7P2 107 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 IL2RGP31785 369 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLC25A1P53007 311 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TAS2R46P59540 309 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PJVKQ0ZLH3 352 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FHL1Q13642 323 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF239Q16600 458 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 HIKESHIQ53FT3 197 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FAM53AQ6NSI3 398 aaPredicted RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 DHRS11Q6UWP2 260 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 DOK3Q7L591 496 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 MRPL41Q8IXM3 137 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLC35G3Q8N808 338 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 WDSUB1Q8N9V3 476 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 OR6K3Q8NGY3 331 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 CPT1CQ8TCG5 803 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 TCTEX1D2Q8WW35 142 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 EXTL1Q92935 676 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 MEGF10Q96KG7 1140 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLC19A3Q9BZV2 496 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SMCO4Q9NRQ5 59 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PRELID3BQ9Y3B1 194 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 A0A0J9YW62 118 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ARGFXA6NJG6 315 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 LINC00587B1AMM8 73 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 G3V3Q6 166 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 GSTZ1O43708 216 aaPredicted RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 GPR137BO60478 399 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SFT2D2O95562 160 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 DUS4LO95620 317 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 HPP00738 406 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FABP1P07148 127 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FTH1P19P0C7X4 201 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 GLB1P16278 677 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 NHLH1Q02575 133 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF826PQ6ZT77 177 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 GAPTQ8N292 157 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ZNF709Q8N972 641 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 FGF11Q92914 225 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 ADIPOR1Q96A54 375 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 PINX1Q96BK5 328 aaKnown RBP4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SLX1AQ9BQ83 275 aa4.34□□□□□ -1.71
CCDC39-204ENST00000476379 SCNM1Q9BWG6 230 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms