RNA–Protein interactions for RNA: ENST00000475944.1

CDRT1-205, CMT1A duplicated region transcript 1, humanhuman

TSL 3

Gene CDRT1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-205ENST00000475944 TMED1Q13445 227 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 RBM39Q14498 530 aaKnown RBP8.61□□□□□ -1.03
CDRT1-205ENST00000475944 KDM4DQ6B0I6 523 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 ZDHHC13Q8IUH4 622 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 CHST4Q8NCG5 386 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 WWC2-AS2Q96NR7 200 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 OPALINQ96PE5 141 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 B9D2Q9BPU9 175 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 ZNF649Q9BS31 505 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 COMMD4Q9H0A8 199 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 RHOFQ9HBH0 211 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 ZMAT5Q9UDW3 170 aaKnown RBP8.61□□□□□ -1.03
CDRT1-205ENST00000475944 GNG8Q9UK08 70 aa8.61□□□□□ -1.03
CDRT1-205ENST00000475944 AMMECR1Q9Y4X0 333 aaPredicted RBP8.61□□□□□ -1.03
CDRT1-205ENST00000475944 KDM4BO94953 1096 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 ISG15P05161 165 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 SLC6A1P30531 599 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 GDNFP39905 211 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 THBS3P49746 956 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 ISL1P61371 349 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 SCN1BQ07699 218 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 BNIP1Q12981 228 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 ATP6AP1Q15904 470 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 TP53I3Q53FA7 332 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 KRBOX4Q5JUW0 171 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 ETV3LQ6ZN32 361 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 THNSL2Q86YJ6 484 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 MRPL41Q8IXM3 137 aaKnown RBP8.6□□□□□ -1.03
CDRT1-205ENST00000475944 SAXO1Q8IYX7 474 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 RDH10Q8IZV5 341 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 OR2G2Q8NGZ5 317 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 OR9G1Q8NH87 305 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 CHPT1Q8WUD6 406 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 RFKQ969G6 155 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 TOMM40LQ969M1 308 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 RFT1Q96AA3 541 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 RPEQ96AT9 228 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 FGGYQ96C11 551 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 GABARAPL1Q9H0R8 117 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 NEK6Q9HC98 313 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 OR6C3Q9NZP0 311 aa8.6□□□□□ -1.03
CDRT1-205ENST00000475944 IGKV1-12A0A0C4DH73 117 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 NUDT19A8MXV4 375 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 LY6LH3BQJ8 138 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 IGKV1D-12P01611 117 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 MT-ND2P03891 347 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 VSIG8P0DPA2 414 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 NFYBP25208 207 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 RPL23AP62750 156 aaKnown RBP8.59□□□□□ -1.03
CDRT1-205ENST00000475944 ZNF85Q03923 595 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 C17orf58Q2M2W7 97 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 UNQ9370/PRO34162Q6UXP9 181 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 OR2W3Q7Z3T1 314 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 KCTD20Q7Z5Y7 419 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 ZNF329Q86UD4 541 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 OR5D18Q8NGL1 313 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 OR8J1Q8NGP2 316 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 COQ2Q96H96 371 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 MBOAT4Q96T53 435 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 CIB1Q99828 191 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 ZFP57Q9NU63 452 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 ING3Q9NXR8 418 aa8.59□□□□□ -1.03
CDRT1-205ENST00000475944 KBTBD11-OT1A0A1B0GTJ5 212 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A18PA6NE21 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A16PA6NEW6 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A20PA6NIJ5 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A9PA6NNJ1 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 SERPINE3A8MV23 424 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A12PA8MX19 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A5PA8MXJ8 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 SLC33A1O00400 549 aaPredicted RBP8.58□□□□□ -1.04
CDRT1-205ENST00000475944 DEGS1O15121 323 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FGF16O43320 207 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 SNRNP70P08621 437 aaKnown RBP8.58□□□□□ -1.04
CDRT1-205ENST00000475944 HTR1AP08908 422 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 CCDC159P0C7I6 412 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A15PP0C7V4 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A13PP0C7W8 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A14PP0C7W9 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FAM90A24PP0C7X0 464 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 DBTP11182 482 aaKnown RBP8.58□□□□□ -1.04
CDRT1-205ENST00000475944 TMEM11P17152 192 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FASP25445 335 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 MYCNOSP40205 109 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 GLP1RP43220 463 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 RAB7AP51149 207 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 SLC35B1P78383 322 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 HES1Q14469 280 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 ATXN7L3Q14CW9 347 aaPredicted RBP8.58□□□□□ -1.04
CDRT1-205ENST00000475944 Q6P435 159 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 FDX2Q6P4F2 183 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 C8orf86Q6ZUL3 223 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 COMMD1Q8N668 190 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 C5orf56Q8N8D9 126 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 ZNF565Q8N9K5 539 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 KLHL30-AS1Q8NEE0 82 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 OR13C3Q8NGS6 347 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 OR13C9Q8NGT0 318 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 OR56B4Q8NH76 319 aa8.58□□□□□ -1.04
CDRT1-205ENST00000475944 EME1Q96AY2 570 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms