RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, human

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LSM2-211	ENST00000475835	MSTN	O14793	375 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	NKX2-8	O15522	239 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PHF1	O43189	567 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CD5L	O43866	347 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PRKN	O60260	465 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	GDF9	O60383	454 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	YPEL1	O60688	119 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OR7C1	O76099	320 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	SOX14	O95416	240 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	IFNW1	P05000	195 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CTSB	P07858	339 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FCGR3A	P08637	254 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF705D	P0CH99	300 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF705B	P0CI00	300 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	AKAIN1	P0CW23	69 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CT45A6	P0DMU7	189 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CT45A5	P0DMU8	189 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CT45A7	P0DMV0	189 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	IGLC2	P0DOY2	106 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	IGLC3	P0DOY3	106 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CD34	P28906	385 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PRDX2	P32119	198 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ARL2	P36404	184 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CTRL	P40313	264 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TNFSF9	P41273	254 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	GPR1	P46091	355 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	P2RY1	P47900	373 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FUT6	P51993	359 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF133	P52736	654 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	STC1	P52823	247 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MANF	P55145	182 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CLDN15	P56746	228 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FAM3B	P58499	235 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OSTN	P61366	133 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	YBX1	P67809	324 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ROM1	Q03395	351 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	AKR1C1	Q04828	323 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	DLX2	Q07687	328 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF415	Q09FC8	603 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PNRC1	Q12796	327 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ENDOG	Q14249	297 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	EXOSC7	Q15024	291 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MMD	Q15546	238 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF77	Q15935	545 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TBC1D28	Q2M2D7	210 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	HLA-B	Q31612	363 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF385B	Q569K4	471 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CT45A1	Q5HYN5	189 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PRSS36	Q5K4E3	855 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FKBP1C	Q5VVH2	108 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PLXDC2	Q6UX71	529 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	C12orf54	Q6X4T0	127 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TMEM91	Q6ZNR0	172 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF788	Q6ZQV5	615 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	HFE2	Q6ZVN8	426 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	COMMD6	Q7Z4G1	85 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PPP1R27	Q86WC6	154 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CMTM4	Q8IZR5	234 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OSR2	Q8N2R0	312 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	KIR3DL3	Q8N743	410 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	SYT8	Q8NBV8	401 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZNF436-AS1	Q8NC38	126 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ADAD2	Q8NCV1	583 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OR8G5	Q8NG78	346 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OR52E2	Q8NGJ4	325 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	OR2T27	Q8NH04	317 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CT45A3	Q8NHU0	189 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	SLC25A40	Q8TBP6	338 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	NEU4	Q8WWR8	484 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MBD3L1	Q8WWY6	194 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FRZB	Q92765	325 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	RPE	Q96AT9	228 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	PPCDC	Q96CD2	204 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	RNF183	Q96D59	192 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ZMYND19	Q96E35	227 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	C20orf173	Q96LM9	149 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	YPEL2	Q96QA6	119 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	GABRG3	Q99928	467 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TBL1Y	Q9BQ87	522 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	HCAR1	Q9BXC0	346 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	VN1R3	Q9BXE9	311 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	SMIM3	Q9BZL3	60 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	POLR2J3	Q9H1A7	115 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CHST8	Q9H2A9	424 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	RERGL	Q9H628	205 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	POPDC3	Q9HBV1	291 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	SLC52A3	Q9NQ40	469 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MEPE	Q9NQ76	525 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MRPS18A	Q9NVS2	196 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	RLIM	Q9NVW2	624 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	FAM206A	Q9NX38	181 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	ALKBH4	Q9NXW9	302 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	THYN1	Q9P016	225 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TMEFF2	Q9UIK5	374 aa	Predicted RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	YARS2	Q9Y2Z4	477 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	RNF115	Q9Y4L5	304 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	TNS1	Q9HBL0	1735 aa	Known RBP	3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	MYO16	Q9Y6X6	1858 aa		3.35	□□□□□ -1.87
LSM2-211	ENST00000475835	CKAP5	Q14008	2032 aa		3.34	□□□□□ -1.87
LSM2-211	ENST00000475835	NIN	Q8N4C6	2090 aa		3.34	□□□□□ -1.87

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms