RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 PEG10Q86TG7 708 aaKnown RBP5.93□□□□□ -1.46
SHQ1-207ENST00000475558 ZNF554Q86TJ5 538 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 CALHM1Q8IU99 346 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SNX29P2Q8IUI4 249 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 LYSMD2Q8IV50 215 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 POC5Q8NA72 575 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 TMEM104Q8NE00 496 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 DUSP18Q8NEJ0 188 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 EMG1Q92979 244 aaKnown RBP5.93□□□□□ -1.46
SHQ1-207ENST00000475558 YIPF5Q969M3 257 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 FBXW5Q969U6 566 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SEH1LQ96EE3 360 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 PIK3IP1Q96FE7 263 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 PERPQ96FX8 193 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 MED30Q96HR3 178 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 MEGF10Q96KG7 1140 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SPACA5Q96QH8 159 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SYT3Q9BQG1 590 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 NRIP2Q9BQI9 281 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 GSX2Q9BZM3 304 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 BANF2Q9H503 90 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 HES4Q9HCC6 221 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 DYNLRB1Q9NP97 96 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 RBFOX1Q9NWB1 397 aaKnown RBP5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SLC23A1Q9UHI7 598 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 SCP2D1Q9UJQ7 156 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 MXRA5Q9NR99 2828 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 USF3Q68DE3 2245 aa5.93□□□□□ -1.46
SHQ1-207ENST00000475558 ANK3Q12955 4377 aaKnown RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 TRAV38-1A0A0B4J264 116 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 PIGBOS1A0A0B4J2F0 54 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 FAM240BA0A1B0GVZ2 78 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ZNF736B4DX44 427 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 DISC1C4P0D8 188 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 F5H5P2 479 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 J3QRK9 145 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 HS3ST1O14792 307 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 MLNRO43193 412 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 SPRY3O43610 288 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ANGPTL7O43827 346 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 OR7C1O76099 320 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 DIRAS3O95661 229 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 IGHV1-46P01743 117 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 IFNA6P05013 189 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 SFTPBP07988 381 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 AKAIN1P0CW23 69 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 NAT1P18440 290 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ANOS1P23352 680 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 GDNFP39905 211 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 EFNB2P52799 333 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 TMEM33P57088 247 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 TAS2R46P59540 309 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 TAF9Q16594 264 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 BAK1Q16611 211 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 MICBQ29980 383 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ALKBH6Q3KRA9 238 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ATPAF1Q5TC12 328 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 STEAP3Q658P3 488 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 OR10K2Q6IF99 312 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 C11orf88Q6PI97 169 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 CRIP3Q6Q6R5 217 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 Q6ZR03 302 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 Q6ZS49 121 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 C11orf53Q8IXP5 236 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 OR5D18Q8NGL1 313 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 CHPT1Q8WUD6 406 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 TMEM158Q8WZ71 300 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 SLAMF9Q96A28 289 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 OR2V2Q96R30 315 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 SDHCQ99643 169 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 CMSS1Q9BQ75 279 aaKnown RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 SLC25A21Q9BQT8 299 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 PECRQ9BY49 303 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 FAM234AQ9H0X4 552 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 UBTD1Q9HAC8 227 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 MSL2Q9HCI7 577 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 MYOZ1Q9NP98 299 aaPredicted RBP5.92□□□□□ -1.46
SHQ1-207ENST00000475558 IFT46Q9NQC8 304 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 OPN4Q9UHM6 478 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 PPP1R3CQ9UQK1 317 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 CACNG2Q9Y698 323 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 ABCA1O95477 2261 aa5.92□□□□□ -1.46
SHQ1-207ENST00000475558 PPIAL4EA0A075B759 164 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 TRBV6-6A0A0A6YYG2 114 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 IGKV1-12A0A0C4DH73 117 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 KIR2DS1A0A191URI9 304 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 hCG_1807616A0A1W2PRN6 198 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 ANKRD20A5PA0PJZ0 165 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 FOXI3A8MTJ6 420 aaPredicted RBP5.91□□□□□ -1.46
SHQ1-207ENST00000475558 SRRM5B3KS81 715 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 PPIAL4DF5H284 164 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 H0YL77 283 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 MFNGO00587 321 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 GEMIN2O14893 280 aaKnown RBP5.91□□□□□ -1.46
SHQ1-207ENST00000475558 SOCS1O15524 211 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 LYRM1O43325 122 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 SYNGR1O43759 233 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 PEX14O75381 377 aa5.91□□□□□ -1.46
SHQ1-207ENST00000475558 DHFRP00374 187 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms