RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 OR56B4Q8NH76 319 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 DNAJC9Q8WXX5 260 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 DUX3Q96PT4 197 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 CLN6Q9NWW5 311 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 OR6C3Q9NZP0 311 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 IL36RNQ9UBH0 155 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 ZNF256Q9Y2P7 627 aaPredicted RBP9.93□□□□□ -0.82
SKA3-206ENST00000475251 SMAD5-AS1Q9Y6J3 95 aa9.93□□□□□ -0.82
SKA3-206ENST00000475251 ODAMA1E959 279 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 SEC14L6B5MCN3 397 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 AP4M1O00189 453 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 SNX3O60493 162 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 RPP14O95059 124 aaKnown RBP9.92□□□□□ -0.82
SKA3-206ENST00000475251 OR2H2O95918 312 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 LYL1P12980 280 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 BCL3P20749 454 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 PRKACBP22694 351 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 CDX1P47902 265 aaPredicted RBP9.92□□□□□ -0.82
SKA3-206ENST00000475251 GLIPR1P48060 266 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 NPBWR2P48146 333 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 POU3F4P49335 361 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 RAB7AP51149 207 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 INSL3P51460 131 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 SNU13P55769 128 aaKnown RBP9.92□□□□□ -0.82
SKA3-206ENST00000475251 MTCP1P56278 107 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 AESQ08117 197 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 BNIP1Q12981 228 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 MADCAM1Q13477 382 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 KIR2DS1Q14954 304 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 PNLIPRP3Q17RR3 467 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 KRBOX4Q5JUW0 171 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 TMEM236Q5W0B7 351 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 PLEKHG7Q6ZR37 379 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 MEPCEQ7L2J0 689 aaKnown RBP9.92□□□□□ -0.82
SKA3-206ENST00000475251 OR8H3Q8N146 312 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 DRAM1Q8N682 238 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 YIPF7Q8N8F6 280 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 RCHY1Q96PM5 261 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 FAM107BQ9H098 131 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 DCLRE1BQ9H816 532 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 RHOFQ9HBH0 211 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 HMG20AQ9NP66 347 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 MRM2Q9UI43 246 aaKnown RBP9.92□□□□□ -0.82
SKA3-206ENST00000475251 LINC00527Q9UJ94 153 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 GSTK1Q9Y2Q3 226 aa9.92□□□□□ -0.82
SKA3-206ENST00000475251 RRP9O43818 475 aaKnown RBP9.91□□□□□ -0.82
SKA3-206ENST00000475251 DCTN3O75935 186 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 OCM2P0CE71 109 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 OCMP0CE72 109 aaPredicted RBP9.91□□□□□ -0.82
SKA3-206ENST00000475251 ZNF44P15621 663 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 NFYBP25208 207 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 GDNFP39905 211 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 ODF4Q2M2E3 257 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 C4orf48Q5BLP8 95 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 NXNL2Q5VZ03 156 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 LCNL1Q6ZST4 164 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 LHFPL2Q6ZUX7 228 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 CATSPERDQ86XM0 798 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 ZNF565Q8N9K5 539 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 HAVCR2Q8TDQ0 301 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 SPSB1Q96BD6 273 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 ADGRL4Q9HBW9 690 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 MED4Q9NPJ6 270 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 ARL8BQ9NVJ2 186 aa9.91□□□□□ -0.82
SKA3-206ENST00000475251 RYR2Q92736 4967 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 LCE6AA0A183 80 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 KBTBD11-OT1A0A1B0GTJ5 212 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 A0A1W2PPI3 338 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 J3QR06 171 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 MAGEB4O15481 346 aaPredicted RBP9.9□□□□□ -0.82
SKA3-206ENST00000475251 LY86O95711 162 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 IGKV1D-33P01593 117 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 IGKV1-33P01594 117 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 ELANEP08246 267 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 UBCP0CG48 685 aaKnown RBP9.9□□□□□ -0.82
SKA3-206ENST00000475251 CRISP1P54107 249 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 PDZK1IP1Q13113 114 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 FOXE3Q13461 319 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 GPR50Q13585 617 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 TMEM179BQ7Z7N9 219 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 ASB9Q96DX5 294 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 KIRREL1Q96J84 757 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 COMMD4Q9H0A8 199 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 ZMAT4Q9H898 229 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 CHCHD3Q9NX63 227 aaKnown RBP9.9□□□□□ -0.82
SKA3-206ENST00000475251 SCOCQ9UIL1 159 aa9.9□□□□□ -0.82
SKA3-206ENST00000475251 H3BSH0 61 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 CCRL2O00421 344 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 MPZL2O60487 215 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 SULT1C4O75897 302 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 KDM4BO94953 1096 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 FAM107AO95990 144 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 RPLP1P05386 114 aaKnown RBP9.89□□□□□ -0.83
SKA3-206ENST00000475251 CALCBP10092 127 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 C21orf33P30042 268 aaPredicted RBP9.89□□□□□ -0.83
SKA3-206ENST00000475251 MS4A2Q01362 244 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 HNF4GQ14541 408 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 C17orf58Q2M2W7 97 aa9.89□□□□□ -0.83
SKA3-206ENST00000475251 DEFB136Q30KP8 78 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms