RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 SNRPGP62308 76 aaKnown RBP11.13□□□□□ -0.63
CCDC78-209ENST00000474647 RBM39Q14498 530 aaKnown RBP11.13□□□□□ -0.63
CCDC78-209ENST00000474647 OR52W1Q6IF63 320 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 ETV3LQ6ZN32 361 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 MEPCEQ7L2J0 689 aaKnown RBP11.13□□□□□ -0.63
CCDC78-209ENST00000474647 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 Q8IYB0 196 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 OSR2Q8N2R0 312 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 SETD9Q8NE22 299 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 ANKRD60Q9BZ19 345 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 CHST5Q9GZS9 411 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 ADGRL4Q9HBW9 690 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 H2AFY2Q9P0M6 372 aaPredicted RBP11.13□□□□□ -0.63
CCDC78-209ENST00000474647 HSPE1-MOB4S4R3N1 261 aa11.13□□□□□ -0.63
CCDC78-209ENST00000474647 TOR1AO14656 332 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 MPZL2O60487 215 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 KRT8P05787 483 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 GNAO1P09471 354 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 CEACAM3P40198 252 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 BDH1Q02338 343 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 DCTN2Q13561 401 aaKnown RBP11.12□□□□□ -0.63
CCDC78-209ENST00000474647 SLC25A30Q5SVS4 291 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 NXNL2Q5VZ03 156 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 Q6ZSR3 168 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 C8orf86Q6ZUL3 223 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 SSX6Q7RTT6 188 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 RNF144BQ7Z419 303 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 RTN4RL2Q86UN3 420 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 GID4Q8IVV7 300 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 C8orf59Q8N0T1 100 aaPredicted RBP11.12□□□□□ -0.63
CCDC78-209ENST00000474647 FAM58AQ8N1B3 248 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 IL4I1Q96RQ9 567 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 MNTQ99583 582 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 ZNF286AQ9HBT8 521 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 CLN6Q9NWW5 311 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 ING3Q9NXR8 418 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 PCDHGB5Q9Y5G0 923 aa11.12□□□□□ -0.63
CCDC78-209ENST00000474647 TRBV2A0A0J9YWF9 115 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 ENTPD6O75354 484 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 SERPINA3P01011 423 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 IGLV1-47P01700 117 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 MYF6P23409 242 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 GDNFP39905 211 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 MNDAP41218 407 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 OR3A4PP47883 348 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 THBS3P49746 956 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 RBP2P50120 134 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 ISL1P61371 349 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 RPL23AP62750 156 aaKnown RBP11.11□□□□□ -0.63
CCDC78-209ENST00000474647 TPTE2P1Q5T6R2 138 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 AADACL4Q5VUY2 407 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 HEPN1Q6WQI6 88 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 C18orf65Q6ZTR6 163 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 CATSPERDQ86XM0 798 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 KLHL30-AS1Q8NEE0 82 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 RHOXF1Q8NHV9 184 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 MCRIP2Q9BUT9 160 aaKnown RBP11.11□□□□□ -0.63
CCDC78-209ENST00000474647 EXOSC4Q9NPD3 245 aaKnown RBP11.11□□□□□ -0.63
CCDC78-209ENST00000474647 MOB4Q9Y3A3 225 aa11.11□□□□□ -0.63
CCDC78-209ENST00000474647 BUB1B-PAK6H3BSN5 160 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 M0QZK8 103 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 NFYBP25208 207 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 ERP29P30040 261 aaKnown RBP11.1□□□□□ -0.63
CCDC78-209ENST00000474647 PTGFRP43088 359 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 GLIPR1P48060 266 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 ATP1B3P54709 279 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 RAB25P57735 213 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 AESQ08117 197 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 HLA-DRB5Q30154 266 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 SPIN3Q5JUX0 258 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 MEDAGQ5VYS4 303 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 UNQ9370/PRO34162Q6UXP9 181 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 OR4D6Q8NGJ1 314 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 FBLIM1Q8WUP2 373 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 APH1BQ8WW43 257 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 RFT1Q96AA3 541 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 CREB3L1Q96BA8 519 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 NOL4LQ96MY1 436 aaPredicted RBP11.1□□□□□ -0.63
CCDC78-209ENST00000474647 HHLA2Q9UM44 414 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 GSTK1Q9Y2Q3 226 aa11.1□□□□□ -0.63
CCDC78-209ENST00000474647 LOC107986453A0A1B0GWG9 222 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 FUOMA2VDF0 154 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 SH2D1BO14796 132 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 WBP4O75554 376 aaKnown RBP11.09□□□□□ -0.63
CCDC78-209ENST00000474647 APOL3O95236 402 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 OR2H2O95918 312 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 LMO1P25800 156 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 PRRX1P54821 245 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 MTCP1P56278 107 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 DGCR2P98153 550 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 SCN1BQ07699 218 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 HES1Q14469 280 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 ZNF146Q15072 292 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 CCDC144NLQ6NUI1 221 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 OR2W3Q7Z3T1 314 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 OR56B4Q8NH76 319 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 CNIH3Q8TBE1 160 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 TOMM40LQ969M1 308 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 Q96MT0 163 aa11.09□□□□□ -0.63
CCDC78-209ENST00000474647 DUX3Q96PT4 197 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms