RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 LRTM2Q8N967 370 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 INO80EQ8NBZ0 244 aaPredicted RBP18.55■□□□□ 0.56
CCM2-206ENST00000474617 C2orf50Q96LR7 162 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 NRIP2Q9BQI9 281 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 GSX2Q9BZM3 304 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 CXXC4Q9H2H0 198 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 GLS2Q9UI32 602 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 WASF3Q9UPY6 502 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 FAM215AQ9Y5M1 114 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 SLC25A15Q9Y619 301 aa18.55■□□□□ 0.56
CCM2-206ENST00000474617 LILRA1O75019 489 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 IFNA21P01568 189 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 AP2S1P53680 142 aaPredicted RBP18.54■□□□□ 0.56
CCM2-206ENST00000474617 UBA52P62987 128 aaKnown RBP18.54■□□□□ 0.56
CCM2-206ENST00000474617 FOXC1Q12948 553 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 BAMBIQ13145 260 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 ZNF146Q15072 292 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 SLC9A3R2Q15599 337 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 SUMF2Q8NBJ7 301 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 NEK7Q8TDX7 302 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 RSRP1Q9BUV0 290 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 OPN3Q9H1Y3 402 aaPredicted RBP18.54■□□□□ 0.56
CCM2-206ENST00000474617 NAA60Q9H7X0 242 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 ZFP57Q9NU63 452 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 KIF25Q9UIL4 384 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 DEGS1O15121 323 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 KNG1P01042 644 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 ZNF880Q6PDB4 577 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 SPACA3Q8IXA5 215 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 OR8H3Q8N146 312 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 SCCPDHQ8NBX0 429 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 TLNRD1Q9H1K6 362 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 METTL8Q9H825 291 aaKnown RBP18.54■□□□□ 0.56
CCM2-206ENST00000474617 ZNF581Q9P0T4 197 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 PCDHB10Q9UN67 800 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 MSRB2Q9Y3D2 182 aa18.54■□□□□ 0.56
CCM2-206ENST00000474617 IGHV2OR16-5A0A0B4J2B6 119 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 KANTRA0A1W2PQU2 76 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 A0A1W2PR80 420 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 K7ENP7 123 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 CCSO14618 274 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 LYL1P12980 280 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 UCNP55089 124 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 PIGPP57054 158 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 RND3P61587 244 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 ANKRD55Q3KP44 614 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 POC1AQ8NBT0 407 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 OR4A4PQ8NGN8 299 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 MUCL1Q96DR8 90 aa18.53■□□□□ 0.56
CCM2-206ENST00000474617 IGHV1-18A0A0C4DH31 117 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 C13orf42A0A1B0GVH6 325 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 F8VVB4 439 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 F8VWA3 439 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 PRRG2O14669 202 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 SH2D1BO14796 132 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 PPYP01298 95 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 PI3P19957 117 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 NUP62P37198 522 aaPredicted RBP18.52■□□□□ 0.56
CCM2-206ENST00000474617 BRICD5Q6PL45 260 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 SCARB1Q8WTV0 552 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 RTN4IP1Q8WWV3 396 aaPredicted RBP18.52■□□□□ 0.56
CCM2-206ENST00000474617 SEC22AQ96IW7 307 aa18.52■□□□□ 0.56
CCM2-206ENST00000474617 A0A1B0GW55 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 EEF1E1-BLOC1S5C9J1V9 151 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 NPIPB11E5RHQ5 1161 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L2P0CJ85 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L3P0CJ86 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L4P0CJ87 422 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L5P0CJ88 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L6P0CJ89 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4L7P0CJ90 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 S100GP29377 79 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 ZNF154Q13106 437 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 GAPTQ8N292 157 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DYRK2Q92630 601 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 PHYHIPLQ96FC7 376 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 ABHD17AQ96GS6 310 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 CCDC120Q96HB5 630 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 SCNM1Q9BWG6 230 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 HES4Q9HCC6 221 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DNAJB11Q9UBS4 358 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DUX4Q9UBX2 424 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 FBXO9Q9UK97 447 aaPredicted RBP18.51■□□□□ 0.55
CCM2-206ENST00000474617 AUP1Q9Y679 476 aa18.51■□□□□ 0.55
CCM2-206ENST00000474617 DMXL1Q9Y485 3027 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 TRAV24A0A0B4J272 114 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 BCL2L11O43521 198 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 TIMM8AO60220 97 aaPredicted RBP18.5■□□□□ 0.55
CCM2-206ENST00000474617 KCNJ3P48549 501 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 RPS23P62266 143 aaKnown RBP18.5■□□□□ 0.55
CCM2-206ENST00000474617 TSC22D1Q15714 1073 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 Q6P435 159 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 PRSS54Q6PEW0 395 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 SLC2A9Q9NRM0 540 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 RASL12Q9NYN1 266 aa18.5■□□□□ 0.55
CCM2-206ENST00000474617 URB1O60287 2271 aaKnown RBP18.49■□□□□ 0.55
CCM2-206ENST00000474617 FAM221AA4D161 298 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 TUSC2O75896 110 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 AGFG2O95081 481 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 NXPH2O95156 264 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms