RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 ZNF665Q9H7R5 613 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 CISD1Q9NZ45 108 aaKnown RBP16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 LRFN1Q9P244 771 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 MMACHCQ9Y4U1 282 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 GON4LQ3T8J9 2241 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 TRAV1-1A0A0B4J248 108 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 ETV2O00321 342 aaPredicted RBP16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 IGLV3-1P01715 115 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 MBP02144 154 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 BCL2P10415 239 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 VAMP2P63027 116 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 PAX5Q02548 391 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 CLN3Q13286 438 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 DPPA3Q6W0C5 159 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 MOB3AQ96BX8 217 aa16.14■□□□□ 0.17
ECHDC1-214ENST00000474289 A0A1W2PNV4 684 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 MARCH11A6NNE9 402 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 B4DGG1 531 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 TRDCB7Z8K6 153 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 SLC33A1O00400 549 aaPredicted RBP16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 ANGPTL7O43827 346 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 DHRS3O75911 302 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 IGHG1P01857 330 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 ZNF154Q13106 437 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 BRICD5Q6PL45 260 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 C20orf196Q8IYI0 205 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 ST8SIA1Q92185 356 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 DDIT4LQ96D03 193 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 R3HDM4Q96D70 268 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 ALKBH4Q9NXW9 302 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 KIAA2026Q5HYC2 2103 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 C3orf85A0A1B0GTC6 90 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 M0R143 59 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 MMP7P09237 267 aaPredicted RBP16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 RAB4AP20338 218 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 GRB2P62993 217 aaKnown RBP16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 TEX38Q6PEX7 206 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 CCDC71LQ8N9Z2 235 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 TPSD1Q9BZJ3 242 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 CTDSP1Q9GZU7 261 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 VAX2Q9UIW0 290 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 PIGLQ9Y2B2 252 aa16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 COL5A1P20908 1838 aaPredicted RBP16.13■□□□□ 0.17
ECHDC1-214ENST00000474289 CA3P07451 260 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 TDGF1P3P51864 188 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 TAS2R30P59541 319 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 YPEL5P62699 121 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 HNF4GQ14541 408 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 MAML2Q8IZL2 1156 aaPredicted RBP16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 PP6455Q8WZ26 134 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 THOC3Q96J01 351 aaKnown RBP16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 SOHLH2Q9NX45 425 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 P4HTMQ9NXG6 502 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 PIAS3Q9Y6X2 628 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 V9GYS6 101 aa16.12■□□□□ 0.17
ECHDC1-214ENST00000474289 TNFSF12-TNFSF13A0A0A6YY99 330 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 ANKUB1A6NFN9 424 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 NUBP1P53384 320 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 C16orf47Q6ZP98 133 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 UEVLDQ8IX04 471 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 H1FOOQ8IZA3 346 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 TMEM222Q9H0R3 208 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 COPS7AQ9UBW8 275 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 LAMP3Q9UQV4 416 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 THADAQ6YHU6 1953 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 EYSQ5T1H1 3165 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 MPPED1O15442 326 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 PFN1P07737 140 aaKnown RBP16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 AADACP22760 399 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 PDLIM4P50479 330 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 UCP3P55916 312 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 BAXQ07812 192 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 PMS2P11Q13670 270 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 RSPO4Q2I0M5 234 aaPredicted RBP16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 C9orf50Q5SZB4 431 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 C1orf189Q5VU69 101 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 SLC25A47Q6Q0C1 308 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 ZNF66Q6ZN08 573 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 IL22RA1Q8N6P7 574 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 ATP5SQ99766 215 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 PYGO2Q9BRQ0 406 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 MED12Q93074 2177 aa16.11■□□□□ 0.17
ECHDC1-214ENST00000474289 F5H5K5 113 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 ADAM20O43506 726 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 SPRY1O43609 319 aaPredicted RBP16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 NXPH3O95157 252 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 THNSL2Q86YJ6 484 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 PRSS58Q8IYP2 241 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 ZNF441Q8N8Z8 693 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 NECAP1Q8NC96 275 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 TUBG1P23258 451 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 ERVFC1-1P60608 527 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 HERV-K104P61576 105 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 NSDHLQ15738 373 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 IQCJQ1A5X6 159 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 ZNF787Q6DD87 383 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 TMEM92Q6UXU6 159 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 OR1N1Q8NGS0 311 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 SPIN2AQ99865 258 aa16.1■□□□□ 0.17
ECHDC1-214ENST00000474289 SPIN2BQ9BPZ2 258 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms