RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, human

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRAT1-205	ENST00000473879	LYNX1	P0DP58	116 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	COL8A2	P25067	703 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	CHAT	P28329	748 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	PRSS3	P35030	304 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	INPP1	P49441	399 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	GZMK	P49863	264 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	GMFB	P60983	142 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	ZNF146	Q15072	292 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	PNLIPRP3	Q17RR3	467 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	ZNF260	Q3ZCT1	412 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	CDNF	Q49AH0	187 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	SPRN	Q5BIV9	151 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	NKAPL	Q5M9Q1	402 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	HACD4	Q5VWC8	232 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	GCSAM	Q8N6F7	178 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	SMIM4	Q8WVI0	70 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	FCAMR	Q8WWV6	532 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	ARHGAP5-AS1	Q96IT6	56 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	PECR	Q9BY49	303 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	IFT22	Q9H7X7	185 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	SCPEP1	Q9HB40	452 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	PLEKHJ1	Q9NW61	149 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	DNAJB11	Q9UBS4	358 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	ABCA1	O95477	2261 aa		11.11	□□□□□ -0.63
BRAT1-205	ENST00000473879	IGHV1-69-2	A0A0G2JMI3	117 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	TMEM235	A6NFC5	223 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879		A8MV72	311 aa	Predicted RBP	11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	SH2D1B	O14796	132 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	WNT9B	O14905	357 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	CA11	O75493	328 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	LHB	P01229	141 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	GLA	P06280	429 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	LPL	P06858	475 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	MELTF	P08582	738 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	IL7	P13232	177 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	ZNF44	P15621	663 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	GNB3	P16520	340 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	FUT3	P21217	361 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	PMEL	P40967	661 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	TMEM50B	P56557	158 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	TMEM33	P57088	247 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	GNG2	P59768	71 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	MRPS15	P82914	257 aa	Known RBP	11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	PLAC9	Q5JTB6	97 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	ATAD3C	Q5T2N8	411 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	YIPF5	Q969M3	257 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	SDHC	Q99643	169 aa	Predicted RBP	11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	SEBOX	Q9HB31	216 aa	Predicted RBP	11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	ABCB10	Q9NRK6	738 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	TMEM160	Q9NX00	188 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	RCC2	Q9P258	522 aa	Known RBP	11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	NLK	Q9UBE8	527 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	IL36RN	Q9UBH0	155 aa		11.1	□□□□□ -0.63
BRAT1-205	ENST00000473879	DEGS1	O15121	323 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	HAND1	O96004	215 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	CYB5R3	P00387	301 aa	Predicted RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	EGR1	P18146	543 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	CBX5	P45973	191 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ACTB	P60709	375 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ACTG1	P63261	375 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	DGCR2	P98153	550 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	SSBP1	Q04837	148 aa	Known RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	SCN1B	Q07699	218 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ARFRP1	Q13795	201 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	RBM39	Q14498	530 aa	Known RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	MICB	Q29980	383 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	HFE	Q30201	348 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	SIGIRR	Q6IA17	410 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	C6orf201	Q7Z4U5	140 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	BOLL	Q8N9W6	283 aa	Known RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	C19orf18	Q8NEA5	215 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ST8SIA4	Q92187	359 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	THAP7	Q9BT49	309 aa	Predicted RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	WDR13	Q9H1Z4	485 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ZMAT3	Q9HA38	289 aa	Known RBP	11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	TMEM106B	Q9NUM4	274 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	OR14J1	Q9UGF5	321 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	WIPI2	Q9Y4P8	454 aa		11.09	□□□□□ -0.63
BRAT1-205	ENST00000473879	ISPD	A4D126	451 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	MCRIP1	C9JLW8	97 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	TMEM178B	H3BS89	294 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	RBBP9	O75884	186 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	OR2H2	O95918	312 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	CD3G	P09693	182 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	MUC1	P15941	1255 aa	Predicted RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	ZNF16	P17020	682 aa	Predicted RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	DUSP1	P28562	367 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	CD80	P33681	288 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	GPR6	P46095	362 aa	Predicted RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	AP3S2	P59780	193 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	BAK1	Q16611	211 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	RNASE12	Q5GAN4	147 aa	Known RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	OR52I2	Q8NH67	350 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	NEK7	Q8TDX7	302 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	GPX8	Q8TED1	209 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	CCL17	Q92583	94 aa		11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	GCDH	Q92947	438 aa	Predicted RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	MSI2	Q96DH6	328 aa	Known RBP	11.08	□□□□□ -0.64
BRAT1-205	ENST00000473879	C1orf159	Q96HA4	380 aa		11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms