RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 BATF2Q8N1L9 274 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 LYRM2Q9NU23 88 aaPredicted RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 C19orf25Q9UFG5 118 aaPredicted RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 CHCHD2Q9Y6H1 151 aaPredicted RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 TGIF2-C20orf24A0A0A6YYL0 155 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 ADAM20O43506 726 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 MRPS34P82930 218 aaKnown RBP12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 RUNX1Q01196 453 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 SPNS3Q6ZMD2 512 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 P4HA3Q7Z4N8 544 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 TBC1D26Q86UD7 250 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF100Q8IYN0 542 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 OR10D4PQ8NGN7 298 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 OR1F12Q8NHA8 337 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 OPA3Q9H6K4 179 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 GLRX2Q9NS18 164 aa12.31□□□□□ -0.44
NHLRC3-204ENST00000473371 SPEGQ15772 3267 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 PROB1E7EW31 1015 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 CYB5BO43169 146 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 OR7C1O76099 320 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 ERVFRD-1P60508 538 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 OR8B8Q15620 311 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM211Q6ICI0 200 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 CDPF1Q6NVV7 123 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 FAM185AQ8N0U4 392 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 GNPNAT1Q96EK6 184 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 FOXD3Q9UJU5 478 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 ADAMTS20P59510 1910 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 A0A087WZY1 265 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 CEP290O15078 2479 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SYNGR3O43761 229 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 NXPH3O95157 252 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HAAOP46952 286 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 RPL23AP62750 156 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 DEFA6Q01524 100 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF506Q5JVG8 444 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 Q6ZPA2 131 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SELENOHQ8IZQ5 122 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SMRP1Q8NCR6 262 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 CADM4Q8NFZ8 388 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 CPNE4Q96A23 557 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 INTS12Q96CB8 462 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 RARRES3Q9UL19 164 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 NOSIPQ9Y314 301 aaKnown RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF732B4DXR9 585 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SEC14L6B5MCN3 397 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BKO60814 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 DKK1O94907 266 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BJP06899 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 PATE4P0C8F1 98 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 FUT3P21217 361 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BOP23527 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 GNRHRP30968 328 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BBP33778 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BDP58876 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BCP62807 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST2H2BEQ16778 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 PLCXD3Q63HM9 321 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 PIGCQ92535 297 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BHQ93079 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BNQ99877 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HIST1H2BMQ99879 126 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SIRT7Q9NRC8 400 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 SLC7A10Q9NS82 523 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 P4HTMQ9NXG6 502 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 HS3ST3B1Q9Y662 390 aa12.3□□□□□ -0.44
NHLRC3-204ENST00000473371 G3V3Y1 287 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 FUT6P51993 359 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 NKX6-1P78426 367 aaPredicted RBP12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 PDZD11Q5EBL8 140 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 CMTM1Q8IZ96 169 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 IL22RA1Q8N6P7 574 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 ZIC4Q8N9L1 334 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 LAMA1P25391 3075 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 CXorf65A6NEN9 183 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 RBM11P57052 281 aaKnown RBP12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 TLE4Q04727 773 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 RBMXL1Q96E39 390 aaKnown RBP12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM56Q96MV1 263 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 GPHA2Q96T91 129 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 FAM86C1Q9NVL1 165 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 DKKL1Q9UK85 242 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 TMEM56-RWDD3S4R434 201 aa12.29□□□□□ -0.44
NHLRC3-204ENST00000473371 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF587BE7ETH6 402 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 TNFSF11O14788 317 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 PPP1R2P9O14990 202 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 ATXN7O15265 892 aaPredicted RBP12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 LY86O95711 162 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 HBE1P02100 147 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 TRGC2P03986 189 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 EPHA1P21709 976 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 GLIPR1P48060 266 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 IL36GQ9NZH8 169 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 PTRH2Q9Y3E5 179 aaKnown RBP12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 CELA2AP08217 269 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF32P17041 273 aa12.28□□□□□ -0.44
NHLRC3-204ENST00000473371 ZNF154Q13106 437 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms