RNA–Protein interactions for RNA: ENST00000472760.1

PRPF40A-208, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 243 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-208ENST00000472760 IGKV1-33P01594 117 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 HLA-AP01891 365 aaKnown RBP2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 APOA1P02647 267 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 RPA3P35244 121 aaPredicted RBP2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 LGALS7P47929 136 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 TRAM1Q15629 374 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 KRTAP25-1Q3LHN0 102 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 Q3ZCU0 254 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 AADACL4Q5VUY2 407 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 NXNL2Q5VZ03 156 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 HCP5Q6MZN7 132 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 WDR59Q6PJI9 974 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 Q6ZQT7 251 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 C10orf107Q8IVU9 208 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 SPICQ8N5J4 248 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 EIF4E3Q8N5X7 224 aaKnown RBP2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 BPIFB6Q8NFQ5 453 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 OR2M3Q8NG83 312 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 BIRC8Q96P09 236 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 OLFM3Q96PB7 478 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 AGPAT3Q9NRZ7 376 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 NXT1Q9UKK6 140 aaKnown RBP2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
PRPF40A-208ENST00000472760 SPATA31E1Q6ZUB1 1445 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 SVILO95425 2214 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 TRAV8-3A0A0A6YYJ7 113 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 BOLA2-SMG1P6H3BVE0 249 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 UBDO15205 165 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 IGKV5-2P06315 115 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 SLC2A1P11166 492 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 CCL2P13500 99 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 ETV1P50549 477 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 UBE2KP61086 200 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 GOLGA7BQ2TAP0 167 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 CASTOR1Q8WTX7 329 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 IFT81Q8WYA0 676 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 CATSPER2Q96P56 530 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 GOLPH3Q9H4A6 298 aa2.28□□□□□ -2.04
PRPF40A-208ENST00000472760 THADAQ6YHU6 1953 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 GOLGA8IPA6NC78 632 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 A8MWP4 228 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 GGTLC3B5MD39 225 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 ZNF708P17019 499 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 CNTFRP26992 372 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 PSMB9P28065 219 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 S100A2P29034 98 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 CRABP2P29373 138 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 HBG1P69891 147 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 HBG2P69892 147 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 LY6G5BQ8NDX9 201 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 ZNF738Q8NE65 137 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 OR2AE1Q8NHA4 323 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 APOBEC3DQ96AK3 386 aaPredicted RBP2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 SUCNR1Q9BXA5 334 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 CYB5R1Q9UHQ9 305 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 NAGKQ9UJ70 344 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 USH1CQ9Y6N9 552 aa2.27□□□□□ -2.05
PRPF40A-208ENST00000472760 I3L4J1 428 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 GTF2H1P32780 548 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 TGFBR2P37173 567 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 CBX5P45973 191 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 BAXQ07812 192 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 CDRT4Q8N9R6 151 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 TMEM239Q8WW34 195 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 CCDC124Q96CT7 223 aaKnown RBP2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 SLC25A44Q96H78 314 aaPredicted RBP2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 PYURFQ96I23 114 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 CPB2Q96IY4 423 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 TRIB3Q96RU7 358 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 IFT46Q9NQC8 304 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 LTBP4Q8N2S1 1624 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 NACADO15069 1562 aa2.26□□□□□ -2.05
PRPF40A-208ENST00000472760 TMEM131Q92545 1883 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 A0A1W2PRG6 482 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 E7EQL1 145 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 H3BMM0 161 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 PLPP3O14495 311 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 SHOX2O60902 331 aaPredicted RBP2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 CST4P01036 141 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 LCN1P31025 176 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 MAGEA3P43357 314 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 BCL2A1Q16548 175 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 PSG3Q16557 428 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 CEACAM21Q3KPI0 293 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 SMARCD3Q6STE5 483 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 Q6ZT83 130 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 LYZL2Q7Z4W2 148 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 MARCH3Q86UD3 253 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 MUC7Q8TAX7 377 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 MAL2Q969L2 176 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 UBE2WQ96B02 151 aa2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 METTL8Q9H825 291 aaKnown RBP2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 ZNF443Q9Y2A4 671 aaPredicted RBP2.25□□□□□ -2.05
PRPF40A-208ENST00000472760 POLR3AO14802 1390 aaPredicted RBP2.24□□□□□ -2.05
PRPF40A-208ENST00000472760 SYNRGQ9UMZ2 1314 aa2.24□□□□□ -2.05
PRPF40A-208ENST00000472760 IGHV2-26A0A0B4J1V2 119 aa2.24□□□□□ -2.05
PRPF40A-208ENST00000472760 A6NED7 52 aa2.24□□□□□ -2.05
PRPF40A-208ENST00000472760 CDIPTO14735 213 aa2.24□□□□□ -2.05
PRPF40A-208ENST00000472760 PSCAO43653 123 aa2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms