RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 Q6P435 159 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 ZBTB49Q6ZSB9 765 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 TRAPPC6BQ86SZ2 158 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 DHFR2Q86XF0 187 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 CATSPERDQ86XM0 798 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 THNSL2Q86YJ6 484 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 ZNF695Q8IW36 515 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 ADGRG5Q8IZF4 528 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 RDH10Q8IZV5 341 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 FAM58AQ8N1B3 248 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 PRSS35Q8N3Z0 413 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 ZNF596Q8TC21 504 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 LEAP2Q969E1 77 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 MOB4Q9Y3A3 225 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 SNX5Q9Y5X3 404 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 HSPE1-MOB4S4R3N1 261 aa7.3□□□□□ -1.24
VCL-204ENST00000472585 TRBV2A0A0J9YWF9 115 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 M0QZK8 103 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 IGHG2P01859 326 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 RAP2AP10114 183 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 PRKACAP17612 351 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 SLC35B1P78383 322 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 RBM39Q14498 530 aaKnown RBP7.29□□□□□ -1.24
VCL-204ENST00000472585 FAM98BQ52LJ0 330 aaKnown RBP7.29□□□□□ -1.24
VCL-204ENST00000472585 AADACL4Q5VUY2 407 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 SLX4IPQ5VYV7 408 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 C16orf89Q6UX73 402 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 OVCH2Q7RTZ1 564 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 SLC35F2Q8IXU6 374 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 STPG2Q8N412 459 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 DRAM1Q8N682 238 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 OR56B4Q8NH76 319 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 CHPT1Q8WUD6 406 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 CANT1Q8WVQ1 401 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 ADAT3Q96EY9 351 aaPredicted RBP7.29□□□□□ -1.24
VCL-204ENST00000472585 CHST5Q9GZS9 411 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 FAM107BQ9H098 131 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 PPIL3Q9H2H8 161 aaKnown RBP7.29□□□□□ -1.24
VCL-204ENST00000472585 HMG20AQ9NP66 347 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 ING3Q9NXR8 418 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 TAS2R3Q9NYW6 316 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 HYDINQ4G0P3 5121 aa7.29□□□□□ -1.24
VCL-204ENST00000472585 TRGV10A0A0A0MS01 117 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 ODAMA1E959 279 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 A6NHS1 94 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 SERPINE3A8MV23 424 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 B2RBV5 119 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 SYT7O43581 403 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 FAM106CPP0CH98 169 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 KIR3DL2P43630 455 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 DAPP51397 102 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 CRISP1P54107 249 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 KIAA0141Q14154 515 aaPredicted RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 KIR2DS1Q14954 304 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 KPNB1Q14974 876 aaKnown RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 CDK5R1Q15078 307 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 PTGES3Q15185 160 aaKnown RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 ZNF260Q3ZCT1 412 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 ASPHD1Q5U4P2 390 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 OR52W1Q6IF63 320 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 FAM53AQ6NSI3 398 aaPredicted RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 COMMD1Q8N668 190 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 OR8U1Q8NH10 309 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 RFT1Q96AA3 541 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 KIRREL1Q96J84 757 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 CNN2Q99439 309 aaKnown RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 MOB1AQ9H8S9 216 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 ARGLU1Q9NWB6 273 aaPredicted RBP7.28□□□□□ -1.24
VCL-204ENST00000472585 GSTK1Q9Y2Q3 226 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 TMEM14AQ9Y6G1 99 aa7.28□□□□□ -1.24
VCL-204ENST00000472585 A0A1W2PPE3 182 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 OOSP1A8MZH6 123 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 J3QR06 171 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 SLC33A1O00400 549 aaPredicted RBP7.27□□□□□ -1.25
VCL-204ENST00000472585 TOR1AO14656 332 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 MITFO75030 526 aaPredicted RBP7.27□□□□□ -1.25
VCL-204ENST00000472585 FRMD6-AS1P0C7T7 363 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 T-ENOLP0DO92 83 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 POU3F4P49335 361 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 PRRX1P54821 245 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 CFHR3Q02985 330 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 PDZK1IP1Q13113 114 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 EBI3Q14213 229 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 GK3PQ14409 553 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 FAM27D1Q5T7N8 215 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 SLC35E3Q7Z769 313 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 ENTHD1Q8IYW4 607 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 RNF152Q8N8N0 203 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 OR13A1Q8NGR1 328 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 BORCS8Q96FH0 119 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 SPACA5Q96QH8 159 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 TBX5Q99593 518 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 COMMD4Q9H0A8 199 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 GAL3ST2Q9H3Q3 398 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 PLSCR3Q9NRY6 295 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 CLN6Q9NWW5 311 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.27□□□□□ -1.25
VCL-204ENST00000472585 PSG11Q9UQ72 335 aa7.27□□□□□ -1.25
VCL-204ENST00000472585 SIRT4Q9Y6E7 314 aaPredicted RBP7.27□□□□□ -1.25
VCL-204ENST00000472585 IGHV3-72A0A0B4J1Y9 119 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms