RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 Q6ZPA2 131 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 DPPA2Q7Z7J5 298 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 COMMD7Q86VX2 200 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 ZNF573Q86YE8 665 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 RELL2Q8NC24 303 aaPredicted RBP4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 OPA3Q9H6K4 179 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 MPC1Q9Y5U8 109 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 ZNF462Q96JM2 2506 aa4.16□□□□□ -1.74
TM4SF1-202ENST00000472441 TRAV39A0A0B4J263 110 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 A0A0D9SG52 128 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 DBX1A6NMT0 343 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 CEACAM18A8MTB9 384 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 AHRRA9YTQ3 701 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 F5H0A9 414 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 H0YL77 283 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 I3L521 148 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 CDIPTO14735 213 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 RRP8O43159 456 aaKnown RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 WDR1O75083 606 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 SCGB1D2O95969 90 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 CRHP06850 196 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 SCTP09683 121 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 HLA-GP17693 338 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 AADACP22760 399 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 LUMP51884 338 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 HERV-K104P61576 105 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 FOXC1Q12948 553 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 PSG7Q13046 419 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 SNTB1Q13884 538 aaKnown RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 RTP5Q14D33 572 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 DAZAP2Q15038 168 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 ACSF3Q4G176 576 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 CLLU1Q5K131 121 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 ZNF660Q6AZW8 331 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 TMEM211Q6ICI0 200 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 IGF2-ASQ6U949 168 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 DHRS11Q6UWP2 260 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 FAM58AQ8N1B3 248 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 PRR18Q8N4B5 295 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 RPRMLQ8N4K4 120 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 GALNT11Q8NCW6 608 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 OR11L1Q8NGX0 322 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 RTN4IP1Q8WWV3 396 aaPredicted RBP4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 ASB13Q8WXK3 278 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 WNT2BQ93097 391 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 GPHA2Q96T91 129 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 OBP2BQ9NPH6 170 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 C1orf123Q9NWV4 160 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 TINAGQ9UJW2 476 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 TNFSF18Q9UNG2 199 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 PROCRQ9UNN8 238 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 LHX6Q9UPM6 363 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 KCNIP3Q9Y2W7 256 aa4.15□□□□□ -1.74
TM4SF1-202ENST00000472441 CSPG4Q6UVK1 2322 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RPS10-NUDT3A0A1W2PQS6 291 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RNF222A6NCQ9 220 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 DEGS1O15121 323 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SNAPC5O75971 98 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RLN2P04090 185 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 CTSDP07339 412 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR5AC1P0C628 307 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RPS2P15880 293 aaKnown RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 MPV17P39210 176 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 CYCSP99999 105 aaKnown RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RAB32Q13637 225 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SURF2Q15527 256 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 PLEKHN1Q494U1 663 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 ESCO2Q56NI9 601 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 NHLRC3Q5JS37 347 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 FAM74A1Q5RGS3 127 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 INO80CQ6PI98 192 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 ACOT7LQ6ZUV0 252 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SLC51BQ86UW2 128 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SUMF2Q8NBJ7 301 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR6K3Q8NGY3 331 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 UBALD1Q8TB05 177 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SECTM1Q8WVN6 248 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 CXorf58Q96LI9 332 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 ADAT1Q9BUB4 502 aaKnown RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RTL8AQ9BWD3 113 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RAB18Q9NP72 206 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 ZC4H2Q9NQZ6 224 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 DKK4Q9UBT3 224 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR14J1Q9UGF5 321 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.15□□□□□ -1.752e-6■■■■□ 20
TM4SF1-202ENST00000472441 HRNRQ86YZ3 2850 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 LINC00862A6NCI5 91 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR5B21A6NL26 309 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 H0YIZ8 118 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SIRPB1O00241 398 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 TPD52L2O43399 206 aaKnown RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 CEACAM4O75871 244 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR2F2O95006 317 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 IFNA21P01568 189 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SLC25A4P12235 298 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 RCC1P18754 421 aaPredicted RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 ECI1P42126 302 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 NHLH1Q02575 133 aa4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 SRSF4Q08170 494 aaKnown RBP4.15□□□□□ -1.75
TM4SF1-202ENST00000472441 OR2F1Q13607 317 aa4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms