RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 IGKV1D-13A0A0B4J2D9 117 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 IGKV1-13P0DP09 117 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 PLP2Q04941 152 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 MEX3BQ6ZN04 569 aaKnown RBP12.85□□□□□ -0.35
UBXN11-213ENST00000472155 LDLRAD3Q86YD5 345 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 RDH5Q92781 318 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 AQP10Q96PS8 301 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 RNF122Q9H9V4 155 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 CACNA1DQ01668 2161 aa12.85□□□□□ -0.35
UBXN11-213ENST00000472155 LRP3O75074 770 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 CST4P01036 141 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 PPYP01298 95 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 MBPP02686 304 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-213ENST00000472155 FAM157CP0CG43 387 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 ARR3P36575 388 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 FGF12P61328 243 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 PLEKHN1Q494U1 663 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-213ENST00000472155 SPERTQ8NA61 448 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 SLC30A7Q8NEW0 376 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 Q8NFD4 153 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 STOML3Q8TAV4 291 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 UBALD1Q8TB05 177 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 NEK7Q8TDX7 302 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 OR5P3Q8WZ94 311 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 ERGIC1Q969X5 290 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 MOB3AQ96BX8 217 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 SESN1Q9Y6P5 492 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 PHF1O43189 567 aaPredicted RBP12.84□□□□□ -0.35
UBXN11-213ENST00000472155 COX5BP10606 129 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 GNRHRP30968 328 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 APLNRP35414 380 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 ID4P47928 161 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 TMEM211Q6ICI0 200 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 WDR86Q86TI4 376 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 MSI2Q96DH6 328 aaKnown RBP12.84□□□□□ -0.35
UBXN11-213ENST00000472155 NARS2Q96I59 477 aaKnown RBP12.84□□□□□ -0.35
UBXN11-213ENST00000472155 IP6K3Q96PC2 410 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 TMEM231Q9H6L2 316 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 ASCL3Q9NQ33 180 aa12.84□□□□□ -0.35
UBXN11-213ENST00000472155 ADGRG4Q8IZF6 3080 aa12.83□□□□□ -0.35
UBXN11-213ENST00000472155 TPT1P13693 172 aaKnown RBP12.83□□□□□ -0.36
UBXN11-213ENST00000472155 IGHV1-2P23083 117 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 IDH3GP51553 393 aaPredicted RBP12.83□□□□□ -0.36
UBXN11-213ENST00000472155 SECTM1Q8WVN6 248 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 PHYHIPLQ96FC7 376 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 PARP12Q9H0J9 701 aaKnown RBP12.83□□□□□ -0.36
UBXN11-213ENST00000472155 ZDHHC8Q9ULC8 765 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 CDRT15L2A8MXV6 281 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 B8ZZF3 427 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 TRAPPC2LH3BP13 241 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 NAPSAO96009 420 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 EIF4E3Q8N5X7 224 aaKnown RBP12.83□□□□□ -0.36
UBXN11-213ENST00000472155 TECTBQ96PL2 329 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 OR2J1Q9GZK6 312 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 GP6Q9HCN6 339 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 Q9N2K0 584 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 AMDHD2Q9Y303 409 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 ICE1Q9Y2F5 2266 aa12.83□□□□□ -0.36
UBXN11-213ENST00000472155 SLC33A1O00400 549 aaPredicted RBP12.82□□□□□ -0.36
UBXN11-213ENST00000472155 FGF16O43320 207 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 FBXO24O75426 580 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 DEDDO75618 318 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 RPL12P30050 165 aaKnown RBP12.82□□□□□ -0.36
UBXN11-213ENST00000472155 ASCL1P50553 236 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 MST1LQ2TV78 715 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 ZNF818PQ6ZRF7 136 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 TRIB1Q96RU8 372 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 USB1Q9BQ65 265 aaKnown RBP12.82□□□□□ -0.36
UBXN11-213ENST00000472155 ZC4H2Q9NQZ6 224 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 PTPRZ1P23471 2315 aaPredicted RBP12.82□□□□□ -0.36
UBXN11-213ENST00000472155 MUC6Q6W4X9 2439 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 TRAV24A0A0B4J272 114 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 KRBOX1C9JBD0 128 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 TNFSF12O43508 249 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 AGFG2O95081 481 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 SLC35G3Q8N808 338 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 SUMF2Q8NBJ7 301 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 ADAT1Q9BUB4 502 aaKnown RBP12.82□□□□□ -0.36
UBXN11-213ENST00000472155 FBXL17Q9UF56 701 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 TUBD1Q9UJT1 453 aa12.82□□□□□ -0.36
UBXN11-213ENST00000472155 TSPAN4O14817 238 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 LIAT1Q6ZQX7 453 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 OR5A2Q8NGI9 324 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 OR4A4PQ8NGN8 299 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 GALNT14Q96FL9 552 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 C18orf12Q96KH6 178 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 PRRX2Q99811 253 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 RSRP1Q9BUV0 290 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 RCC2Q9P258 522 aaKnown RBP12.81□□□□□ -0.36
UBXN11-213ENST00000472155 H0YL77 283 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 K7EPK0 472 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 NXPH3O95157 252 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 ZNF14P17017 642 aaPredicted RBP12.81□□□□□ -0.36
UBXN11-213ENST00000472155 ADCYAP1P18509 176 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 ECI1P42126 302 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 TMEM33P57088 247 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 HERV-K104P61576 105 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 SPIN3Q5JUX0 258 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms