RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 TUBG2Q9NRH3 451 aa9.12□□□□□ -0.95
APLF-204ENST00000471727 ASF1BQ9NVP2 202 aa9.12□□□□□ -0.95
APLF-204ENST00000471727 MTCH1Q9NZJ7 389 aa9.12□□□□□ -0.95
APLF-204ENST00000471727 PRSS50Q9UI38 385 aa9.12□□□□□ -0.95
APLF-204ENST00000471727 TMEM56-RWDD3S4R434 201 aa9.12□□□□□ -0.95
APLF-204ENST00000471727 KMT2EQ8IZD2 1858 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 DOCK10Q96BY6 2186 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 C3orf85A0A1B0GTC6 90 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 TMEM218A2RU14 115 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 FAM221AA4D161 298 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 ZNF705EA8MWA4 302 aaPredicted RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 ST8SIA3O43173 380 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 PHF1O43189 567 aaPredicted RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 TUSC2O75896 110 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 IL18BPO95998 194 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 NGFP01138 241 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 IGHG3P01860 377 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 MDH2P40926 338 aaKnown RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 KCNJ3P48549 501 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 TNFSF10P50591 281 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 NUBP1P53384 320 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 PJVKQ0ZLH3 352 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 BTN1A1Q13410 526 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 GNMTQ14749 295 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 PHLDA2Q53GA4 152 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 CMTM1Q8IZ96 169 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 SPAG16Q8N0X2 631 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 NAXEQ8NCW5 288 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 OR4A4PQ8NGN8 299 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 SNIP1Q8TAD8 396 aaKnown RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 DYRK2Q92630 601 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 IL22RA2Q969J5 263 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 BOD1Q96IK1 185 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 RTL8AQ9BWD3 113 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 FGF23Q9GZV9 251 aaPredicted RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 TMEM222Q9H0R3 208 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 ZNF552Q9H707 407 aaPredicted RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 OR2S2Q9NQN1 319 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 TREM2Q9NZC2 230 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 ZNF581Q9P0T4 197 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 LSM5Q9Y4Y9 91 aaKnown RBP9.11□□□□□ -0.95
APLF-204ENST00000471727 LIPGQ9Y5X9 500 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 WDR87Q6ZQQ6 2873 aa9.11□□□□□ -0.95
APLF-204ENST00000471727 ZNF503-AS2A6NEH8 195 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 CDRT15L2A8MXV6 281 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 J3QT63 122 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 KCNAB3O43448 404 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 MBPP02686 304 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 WNT2P09544 360 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 CCL2P13500 99 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 MMP9P14780 707 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 PRKACAP17612 351 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 PVALBP20472 110 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 WNT5AP41221 380 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 TMEM33P57088 247 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 UBE2NP61088 152 aaKnown RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 ZNF169Q14929 603 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 DAZAP2Q15038 168 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 TGIF1Q15583 401 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 SHEQ5VZ18 495 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 TMEM268Q5VZI3 342 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 RPL7L1Q6DKI1 246 aaKnown RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 ZNF880Q6PDB4 577 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 INO80CQ6PI98 192 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 MOB1BQ7L9L4 216 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 LYZL2Q7Z4W2 148 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 FAM58AQ8N1B3 248 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 SVBPQ8N300 66 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 COMMD1Q8N668 190 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 BHLHE23Q8NDY6 225 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 NEK7Q8TDX7 302 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 ARV1Q9H2C2 271 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 OR51I2Q9H344 312 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 PARP11Q9NR21 331 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 FAM212BQ9NTI7 297 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 SPRR3Q9UBC9 169 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 POLDIP2Q9Y2S7 368 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 AMDHD2Q9Y303 409 aa9.1□□□□□ -0.95
APLF-204ENST00000471727 UBE2J1Q9Y385 318 aaPredicted RBP9.1□□□□□ -0.95
APLF-204ENST00000471727 LOC105371267A0A1B0GV96 52 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 ATG12O94817 140 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 ACAA1P09110 424 aaPredicted RBP9.09□□□□□ -0.95
APLF-204ENST00000471727 SEC11BP0C7V7 166 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 GNRHRP30968 328 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 RAB5CP51148 216 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 DEFA5Q01523 94 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 SPEM2Q0P670 501 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 ZNF273Q14593 569 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 C3AR1Q16581 482 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 SP6Q3SY56 376 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 HIKESHIQ53FT3 197 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 C10orf91Q5T1B1 145 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 HAGHLQ6PII5 290 aaPredicted RBP9.09□□□□□ -0.95
APLF-204ENST00000471727 IGF2-ASQ6U949 168 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 IGFL2Q6UWQ7 119 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 MDP1Q86V88 176 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 ZNF695Q8IW36 515 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 FOXRED2Q8IWF2 684 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 LRRC46Q96FV0 321 aa9.09□□□□□ -0.95
APLF-204ENST00000471727 NARS2Q96I59 477 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms