RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 NPIPB6E9PJ23 425 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF32P17041 273 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GPNMBQ14956 572 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ARL17AQ8IVW1 177 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PTX4Q96A99 478 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TP53RKQ96S44 253 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RIF1Q5UIP0 2472 aaKnown RBP11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TMSB15BA0A087X1C1 80 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GALR1P47211 349 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MVB12AQ96EY5 273 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OCIAD1Q9NX40 245 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 hADV38S2A0JD32 116 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SLC35B1P78383 322 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CLEC2AQ6UVW9 174 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FUNDC1Q8IVP5 155 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR10C1Q96KK4 312 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MAP1LC3CQ9BXW4 147 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 VN1R1Q9GZP7 353 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF629Q9UEG4 869 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 IGHV3OR15-7A0A075B7D8 119 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LOC389332A0A1B0GUA5 103 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ETHE1O95571 254 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 AVPR2P30518 371 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CGB2Q6NT52 195 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 IFITM10A6NMD0 228 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 METAP1P53582 386 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PABPC1L2AQ5JQF8 200 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TOMM20LQ6UXN7 152 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MYPOPQ86VE0 399 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ARHGAP5-AS1Q96IT6 56 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR2A25A4D2G3 310 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FGF2P09038 288 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 HLA-GP17693 338 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ATF1P18846 271 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LPAR6P43657 344 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LRP11Q86VZ4 500 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 C12orf57Q99622 126 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 B9D1Q9UPM9 204 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 METTL12A8MUP2 240 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 BCL3P20749 454 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FUT3P21217 361 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 THBS4P35443 961 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MIDNQ504T8 468 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MEIG1Q5JSS6 88 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR13F1Q8NGS4 319 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 C2orf50Q96LR7 162 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CEACAM5P06731 702 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GPX2P18283 190 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TCL1AP56279 114 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 AESQ08117 197 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 KISS1Q15726 138 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LGALSLQ3ZCW2 172 aaPredicted RBP11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF385DQ9H6B1 395 aa11.79□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ADRB1P08588 477 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 DPTQ07507 201 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SPANXN1Q5VSR9 72 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ETV3LQ6ZN32 361 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SSPNQ14714 243 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GCSAMLQ5JQS6 135 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SPAARA0A1B0GVQ0 90 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PRR32B1ATL7 298 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 REG1BP48304 166 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TRAT1Q6PIZ9 186 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 HGDQ93099 445 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CHRNA10Q9GZZ6 450 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 BTAF1O14981 1849 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF26P17031 533 aaPredicted RBP11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 BTF3P20290 206 aaKnown RBP11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GABRG3Q99928 467 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ITGB4P16144 1822 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TANC2Q9HCD6 1990 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FCN1O00602 326 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PTHLHP12272 177 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GALNSP34059 522 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MAVSQ7Z434 540 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SYT8Q8NBV8 401 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR4C16Q8NGL9 310 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 HIST1H1EP10412 219 aaKnown RBP11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FAM53AQ6NSI3 398 aaPredicted RBP11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PRSS41Q7RTY9 318 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PHLDA1Q8WV24 401 aaPredicted RBP11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 NPFFR1Q9GZQ6 430 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CACNG5Q9UF02 275 aa11.78□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 IL11RAQ14626 422 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PDPNQ86YL7 162 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ABHD3Q8WU67 409 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 DCTN5Q9BTE1 182 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 BHLHA15Q7RTS1 189 aaPredicted RBP11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MCHR2Q969V1 340 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 POMT2Q9UKY4 750 aa11.77□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ATG101Q9BSB4 218 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 TRAV38-1A0A0B4J264 116 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 SLC25A35Q3KQZ1 300 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 C4orf45Q96LM5 186 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ASB1Q9Y576 335 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 MTCH2Q9Y6C9 303 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 ARG1P05089 322 aa11.77□□□□□ -0.53
NPHP3-ACAD11-201ENST00000471702 OR8A1Q8NGG7 326 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms