RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ANKRD17O75179 2603 aaKnown RBP15.99■□□□□ 0.15
PSPC1-203ENST00000471658 IGHV4-30-2A0A087WSY4 118 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 CEACAM18A8MTB9 384 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 TMPRSS2O15393 492 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF737O75373 536 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 HIST1H1DP16402 221 aaKnown RBP15.99■□□□□ 0.15
PSPC1-203ENST00000471658 TALDO1P37837 337 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 LSAMPQ13449 338 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 FAM189A2Q15884 450 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 PAN3Q58A45 887 aaKnown RBP15.99■□□□□ 0.15
PSPC1-203ENST00000471658 DNM1P46Q6ZS02 220 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 ABHD1Q96SE0 405 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 SHARPINQ9H0F6 387 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 AUNIPQ9H7T9 357 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 SEBOXQ9HB31 216 aaPredicted RBP15.99■□□□□ 0.15
PSPC1-203ENST00000471658 PDZD2O15018 2839 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 ITPR2Q14571 2701 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 NAV2Q8IVL1 2488 aa15.99■□□□□ 0.15
PSPC1-203ENST00000471658 A0A0A6YYH2 397 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 TMEM235A6NFC5 223 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 A6NJ64 397 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 MFNGO00587 321 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 SIGLEC5O15389 551 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 FSTL3O95633 263 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 OR3A1P47881 315 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 IL18Q14116 193 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 CLEC12BQ2HXU8 276 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 FAM131AQ6UXB0 335 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 DCDC5Q6ZRR9 648 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 LRRC75A-AS1Q8N1F1 130 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 MFSD4AQ8N468 514 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 AKIP1Q9NQ31 210 aa15.98■□□□□ 0.15
PSPC1-203ENST00000471658 SCGNO76038 276 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 GUCA2AQ02747 115 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 TMEM155Q4W5P6 130 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 PLPPR1Q8TBJ4 325 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 ST8SIA4Q92187 359 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 SNX22Q96L94 193 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 HDHD3Q9BSH5 251 aaPredicted RBP15.97■□□□□ 0.15
PSPC1-203ENST00000471658 SPACA1Q9HBV2 294 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 AK3Q9UIJ7 227 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 HSF4Q9ULV5 492 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 NKX6-3A6NJ46 265 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 VWC2LB2RUY7 222 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 MCRIP1C9JLW8 97 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 ETV6P41212 452 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 IL13RA1P78552 427 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 ATXN7L3Q14CW9 347 aaPredicted RBP15.97■□□□□ 0.15
PSPC1-203ENST00000471658 KCNJ8Q15842 424 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF79Q15937 498 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 RNASE12Q5GAN4 147 aaKnown RBP15.97■□□□□ 0.15
PSPC1-203ENST00000471658 SPANXN2Q5MJ10 180 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 MUC20Q8N307 709 aaPredicted RBP15.97■□□□□ 0.15
PSPC1-203ENST00000471658 ZNF561Q8N587 486 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 TMEM185AQ8NFB2 350 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 NEK7Q8TDX7 302 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 NUDT16L1Q9BRJ7 211 aaKnown RBP15.97■□□□□ 0.15
PSPC1-203ENST00000471658 PIMREGQ9BSJ6 248 aa15.97■□□□□ 0.15
PSPC1-203ENST00000471658 CSMD1Q96PZ7 3565 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 VPS13CQ709C8 3753 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 MEIOCA2RUB1 952 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 K7N7A8 449 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 NDUFA2O43678 99 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 TK1P04183 234 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 WNT2P09544 360 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 CSF3P09919 207 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 NR4A2P43354 598 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 GRK1Q15835 563 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 LINC00299Q6ZSB3 139 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 KRTAP1-3Q8IUG1 177 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 TPRX1Q8N7U7 411 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 NUDCD2Q8WVJ2 157 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 MED30Q96HR3 178 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 DNTTIP1Q9H147 329 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 KAAG1Q9UBP8 84 aa15.96■□□□□ 0.15
PSPC1-203ENST00000471658 NDUFS8O00217 210 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 DVL1O14640 695 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 INHBBP09529 407 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 MNDAP41218 407 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 SEC61A1P61619 476 aaKnown RBP15.95■□□□□ 0.14
PSPC1-203ENST00000471658 AESQ08117 197 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 Q5PR19 223 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 ZNF841Q6ZN19 808 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 SLC36A1Q7Z2H8 476 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 PATZ1Q9HBE1 687 aaKnown RBP15.95■□□□□ 0.14
PSPC1-203ENST00000471658 ETAA1Q9NY74 926 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 PCDHB10Q9UN67 800 aa15.95■□□□□ 0.14
PSPC1-203ENST00000471658 IGHV4-61A0A0C4DH41 118 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 MEX3AA1L020 520 aaKnown RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 MEIS3P1A6NDR6 274 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 SSX5O60225 188 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 MELTFP08582 738 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 GSTP1P09211 210 aaKnown RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 RPS2P15880 293 aaKnown RBP15.94■□□□□ 0.14
PSPC1-203ENST00000471658 DSCR9P59020 149 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 EDDM3AQ14507 147 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 HACD4Q5VWC8 232 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 PYHIN1Q6K0P9 492 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 SPICQ8N5J4 248 aa15.94■□□□□ 0.14
PSPC1-203ENST00000471658 CLDND2Q8NHS1 167 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms