RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 ATXN7L3Q14CW9 347 aaPredicted RBP14.55□□□□□ -0.08
VPS72-204ENST00000471423 RUSC1-AS1Q66K80 236 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 BCL6BQ8N143 479 aaPredicted RBP14.55□□□□□ -0.08
VPS72-204ENST00000471423 TSPAN14Q8NG11 270 aa14.55□□□□□ -0.08
VPS72-204ENST00000471423 MS4A7Q9GZW8 240 aaPredicted RBP14.55□□□□□ -0.08
VPS72-204ENST00000471423 METTL8Q9H825 291 aaKnown RBP14.55□□□□□ -0.08
VPS72-204ENST00000471423 TRAV24A0A0B4J272 114 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 TRDV1A0A1B0GX56 115 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 A0A1W2PPH5 198 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 CRTAPO75718 401 aaPredicted RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 OR7C1O76099 320 aaPredicted RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 FPR2P25090 351 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 P2RX3P56373 397 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 SRSF2Q01130 221 aaKnown RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 MEF2CQ06413 473 aaPredicted RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 AESQ08117 197 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 KLRD1Q13241 179 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 PAN3Q58A45 887 aaKnown RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 C1orf100Q5SVJ3 147 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 SYT6Q5T7P8 510 aaPredicted RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 C1orf122Q6ZSJ8 110 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 TCF23Q7RTU1 214 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 TMEM104Q8NE00 496 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 BANF2Q9H503 90 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 ZNF696Q9H7X3 374 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 ING3Q9NXR8 418 aa14.54□□□□□ -0.08
VPS72-204ENST00000471423 AK6Q9Y3D8 172 aaKnown RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 SOX21Q9Y651 276 aaPredicted RBP14.54□□□□□ -0.08
VPS72-204ENST00000471423 A0A087WXM4 84 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 IGHV1-69DA0A0B4J2H0 117 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 hADV38S2A0JD32 116 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 SLC22A1O15245 554 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 TCF21O43680 179 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 IGHV1-69P01742 117 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 CSN2P05814 226 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 MGMTP16455 207 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 GALP22466 123 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 HTR2CP28335 458 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 ERP29P30040 261 aaKnown RBP14.53□□□□□ -0.08
VPS72-204ENST00000471423 DLX6P56179 175 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 C22orf42Q6IC83 251 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 METAP1DQ6UB28 335 aaPredicted RBP14.53□□□□□ -0.08
VPS72-204ENST00000471423 C9orf139Q6ZV77 190 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 LINC00596Q86U02 117 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 ZNF418Q8TF45 676 aaPredicted RBP14.53□□□□□ -0.08
VPS72-204ENST00000471423 FAM46BQ96A09 425 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 COQ2Q96H96 371 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 SUCNR1Q9BXA5 334 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 KCNK15Q9H427 330 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 GHRLQ9UBU3 117 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 LINC00312Q9Y6C7 94 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 DSCAML1Q8TD84 2053 aa14.53□□□□□ -0.08
VPS72-204ENST00000471423 SHISA3A0PJX4 238 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 RNASEK-C17orf49H0YIS7 233 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 UBBP0CG47 229 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 CD37P11049 281 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 PRTN3P24158 256 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 MYL9P24844 172 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 GLIPR1P48060 266 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 ERVFRD-1P60508 538 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 TAF9Q16594 264 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 MPV17LQ2QL34 196 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 KRTAP21-3Q3LHN1 58 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 KRBOX4Q5JUW0 171 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 C11orf42Q8N5U0 333 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 SUMF2Q8NBJ7 301 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 OR6M1Q8NGM8 313 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 TNFRSF14Q92956 283 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 MRPS24Q96EL2 167 aaKnown RBP14.52□□□□□ -0.09
VPS72-204ENST00000471423 ZNF714Q96N38 554 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 DPCDQ9BVM2 203 aaPredicted RBP14.52□□□□□ -0.09
VPS72-204ENST00000471423 SELENOIQ9C0D9 397 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 IFT22Q9H7X7 185 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 UNKLQ9H9P5 680 aaKnown RBP14.52□□□□□ -0.09
VPS72-204ENST00000471423 PLGRKTQ9HBL7 147 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 STUB1Q9UNE7 303 aa14.52□□□□□ -0.09
VPS72-204ENST00000471423 TRAV1-2A0A0B4J238 106 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 FUOMA2VDF0 154 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 SLC17A2O00624 439 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 ZNF728P0DKX0 622 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 VSIG8P0DPA2 414 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 BPIFB3P59826 476 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 P2RY14Q15391 338 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 TUSC1Q2TAM9 212 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 ATAD3CQ5T2N8 411 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 OR10K2Q6IF99 312 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 ZNF782Q6ZMW2 699 aaPredicted RBP14.51□□□□□ -0.09
VPS72-204ENST00000471423 TRAPPC6BQ86SZ2 158 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 SIGLECL1Q8N7X8 197 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 Q96M66 194 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 ZNF48Q96MX3 618 aaPredicted RBP14.51□□□□□ -0.09
VPS72-204ENST00000471423 CST11Q9H112 138 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 OR51E2Q9H255 320 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 VCX3AQ9NNX9 186 aa14.51□□□□□ -0.09
VPS72-204ENST00000471423 TXNL4BQ9NX01 149 aaKnown RBP14.51□□□□□ -0.09
VPS72-204ENST00000471423 MDFIC2A0A1B0GVS7 189 aa14.5□□□□□ -0.09
VPS72-204ENST00000471423 hCG_1809904A0A1W2PP81 198 aa14.5□□□□□ -0.09
VPS72-204ENST00000471423 A0A1W2PPE2 198 aa14.5□□□□□ -0.09
VPS72-204ENST00000471423 A0A1W2PR64 198 aa14.5□□□□□ -0.09
VPS72-204ENST00000471423 A0A1W2PRD5 423 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms