RNA–Protein interactions for RNA: ENST00000471246.1

UBXN4-207, Transcript of UBX domain protein 4, humanhuman

TSL 3

Gene UBXN4, Length 395 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-207ENST00000471246 SLC35A1P78382 337 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 LAMTOR4Q0VGL1 99 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 HES1Q14469 280 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PMVKQ15126 192 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 SS18Q15532 418 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 RPEL1Q2QD12 228 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM176BQ3YBM2 270 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 FBXL19-AS1Q494R0 122 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 N4BP2L1Q5TBK1 243 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CYHR1Q6ZMK1 362 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 ZNF767PQ75MW2 155 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CENPQQ7L2Z9 268 aaPredicted RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 NDUFAF7Q7L592 441 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TAS2R42Q7RTR8 314 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 GABRG1Q8N1C3 465 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 OR8A1Q8NGG7 326 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MFSD8Q8NHS3 518 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 C2orf15Q8WU43 125 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 GSDMAQ96QA5 445 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 SPACA5Q96QH8 159 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 OR2A7Q96R45 310 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MRPL20Q9BYC9 149 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 OR51B5Q9H339 312 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM185BQ9H7F4 350 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 RHOFQ9HBH0 211 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CCNB1IP1Q9NPC3 277 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 MYEF2Q9P2K5 600 aaKnown RBP0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TAC3Q9UHF0 121 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 NAGKQ9UJ70 344 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 SLC7A11Q9UPY5 501 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 HSPE1-MOB4S4R3N1 261 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 TTC21AQ8NDW8 1320 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CMYA5Q8N3K9 4069 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PXDNLA1KZ92 1463 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 CPS1P31327 1500 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 KDM5BQ9UGL1 1544 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 DIP2AQ14689 1571 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 SHROOM2Q13796 1616 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 ADAMTSL3P82987 1691 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 FREM1Q5H8C1 2179 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 PKDREJQ9NTG1 2253 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 FRAS1Q86XX4 4008 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 LRP2P98164 4655 aa0.26□□□□□ -2.37
UBXN4-207ENST00000471246 DYNC1H1Q14204 4646 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PRKDCP78527 4128 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 DIDO1Q9BTC0 2240 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CCDC88CQ9P219 2028 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 YLPM1P49750 1951 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 RBBP6Q7Z6E9 1792 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 COL4A1P02462 1669 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 BIVM-ERCC5R4GMW8 1640 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CUX1P39880 1505 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PKD1P98161 4303 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 DISP2A7MBM2 1401 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PPIP5K1Q6PFW1 1433 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 FGD6Q6ZV73 1430 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 MIA2Q96PC5 1412 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TRRAPQ9Y4A5 3859 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TRAV8-4A0A0B4J246 113 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 A0A0J9YYE9 177 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 ERICH4A6NGS2 130 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 C17orf98A8MV24 154 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 H3BRN7 92 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TEX46H3BTG2 121 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 J3QT63 122 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 XRCC2O43543 280 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 RAB36O95755 333 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 P01737 135 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TRBC1P01850 177 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 LYNX1P0DP58 116 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CTLA4P16410 223 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PSMB9P28065 219 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 C21orf59P57076 290 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 MTPNP58546 118 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CEP55Q53EZ4 464 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CARD17Q5XLA6 110 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM220Q6QAJ8 160 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CLEC19AQ6UXS0 136 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 APRG1Q8IVJ8 170 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 SLC7A5P1Q8MH63 180 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 DAW1Q8N136 415 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 GPATCH11Q8N954 259 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 OR5C1Q8NGR4 320 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 ITFG1Q8TB96 612 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 FAM81AQ8TBF8 368 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 TMEM234Q8WY98 164 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 ING5Q8WYH8 240 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PYURFQ96I23 114 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 DNAJC30Q96LL9 226 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 B9D2Q9BPU9 175 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 MTG1Q9BT17 334 aaPredicted RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 SRRQ9GZT4 340 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 AICDAQ9GZX7 198 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 GEMIN7Q9H840 131 aaKnown RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 GCNT4Q9P109 453 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 KLF13Q9Y2Y9 288 aaPredicted RBP0.25□□□□□ -2.37
UBXN4-207ENST00000471246 OR51B4Q9Y5P0 310 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 SACSQ9NZJ4 4579 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 PLCE1Q9P212 2302 aa0.25□□□□□ -2.37
UBXN4-207ENST00000471246 CACNA1SQ13698 1873 aa0.24□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms